public void MsDataFileUriEncodingTest()
{
var fname = "test.mzML";
var pathSample = SampleHelp.EncodePath(fname, null, -1, null, true, false);
var lockmassParametersA = new LockMassParameters(1.23, 3.45, 4.56);
var lockmassParametersB = new LockMassParameters(1.23, null, 4.56);
Assert.IsTrue(lockmassParametersA.CompareTo(LockMassParameters.EMPTY) > 0);
Assert.IsTrue(lockmassParametersA.CompareTo(null) < 0);
Assert.IsTrue(lockmassParametersB.CompareTo(lockmassParametersA) < 0);
Assert.IsTrue(lockmassParametersA.CompareTo(new LockMassParameters(1.23, 3.45, 4.56)) == 0);
var c = new ChromatogramSet("test", new[] { MsDataFileUri.Parse(pathSample) });
Assert.AreEqual(fname, c.MSDataFilePaths.First().GetFilePath());
Assert.IsTrue(c.MSDataFilePaths.First().GetCentroidMs1());
Assert.IsFalse(c.MSDataFilePaths.First().GetCentroidMs2());
pathSample = SampleHelp.EncodePath(fname, null, -1, lockmassParametersA, false, true);
c = new ChromatogramSet("test", new[] { MsDataFileUri.Parse(pathSample) });
Assert.AreEqual(lockmassParametersA, c.MSDataFilePaths.First().GetLockMassParameters());
Assert.IsTrue(c.MSDataFilePaths.First().GetCentroidMs2());
Assert.IsFalse(c.MSDataFilePaths.First().GetCentroidMs1());
pathSample = SampleHelp.EncodePath(fname, "test_0", 1, lockmassParametersB, false, false);
c = new ChromatogramSet("test", new[] { MsDataFileUri.Parse(pathSample) });
Assert.AreEqual(lockmassParametersB, c.MSDataFilePaths.First().GetLockMassParameters());
Assert.AreEqual("test_0", c.MSDataFilePaths.First().GetSampleName());
Assert.AreEqual(1, c.MSDataFilePaths.First().GetSampleIndex());
Assert.IsFalse(c.MSDataFilePaths.First().GetCentroidMs1());
Assert.IsFalse(c.MSDataFilePaths.First().GetCentroidMs2());
}
protected int CompareTo(MsDataFilePath other)
{
// Culture specific sorting desirable in file paths
// ReSharper disable StringCompareToIsCultureSpecific
int result = FilePath.CompareTo(other.FilePath);
if (result != 0)
{
return(result);
}
result = SampleName.CompareTo(other.SampleName);
if (result != 0)
{
return(result);
}
result = SampleIndex.CompareTo(other.SampleIndex);
if (result != 0)
{
return(result);
}
result = CentroidMs1.CompareTo(other.CentroidMs1);
if (result != 0)
{
return(result);
}
result = CentroidMs2.CompareTo(other.CentroidMs2);
if (result != 0)
{
return(result);
}
return(LockMassParameters.CompareTo(other.LockMassParameters));
// ReSharper restore StringCompareToIsCultureSpecific
}
