public void ShowSpectrum(IScanProvider scanProvider, int transitionIndex, int scanIndex)
{
_msDataFileScanHelper.UpdateScanProvider(scanProvider, transitionIndex, scanIndex);
if (scanProvider != null)
{
comboBoxScanType.Items.Clear();
foreach (var source in new[] { ChromSource.ms1, ChromSource.fragment, ChromSource.sim })
{
foreach (var transition in _msDataFileScanHelper.ScanProvider.Transitions)
{
if (transition.Source == source)
{
comboBoxScanType.Items.Add(_msDataFileScanHelper.NameFromSource(source));
break;
}
}
}
comboBoxScanType.SelectedIndexChanged -= comboBoxScanType_SelectedIndexChanged;
comboBoxScanType.SelectedItem = _msDataFileScanHelper.NameFromSource(_msDataFileScanHelper.Source);
comboBoxScanType.SelectedIndexChanged += comboBoxScanType_SelectedIndexChanged;
comboBoxScanType.Enabled = true;
LoadScan(true, true);
}
else
{
ClearGraph();
// No full scans can be displayed.
_graphHelper.SetErrorGraphItem(new UnavailableMSGraphItem());
}
UpdateUI(false);
}
public void SetScanProvider(IScanProvider newScanProvider)
{
lock (this)
{
if (_scanProvider != null && !ReferenceEquals(_scanProvider, newScanProvider))
{
_cachedScanProviders.Insert(0, _scanProvider);
if (newScanProvider != null)
{
AdoptCachedProvider(newScanProvider);
}
// Queue for disposal
if (_cachedScanProviders.Count > MAX_CACHE_COUNT)
{
_oldScanProviders.Add(_cachedScanProviders[MAX_CACHE_COUNT]);
_cachedScanProviders.RemoveAt(MAX_CACHE_COUNT);
}
}
_scanProvider = newScanProvider;
if (newScanProvider == null) // Called with null when we're disposing
{
_oldScanProviders.AddRange(_cachedScanProviders);
_cachedScanProviders.Clear();
}
Monitor.PulseAll(this);
}
}
public bool Adopt(IScanProvider other)
{
if (!Equals(DocFilePath, other.DocFilePath) || !Equals(DataFilePath, other.DataFilePath))
{
return(false);
}
var scanProvider = other as ScanProvider;
if (scanProvider == null)
{
return(false);
}
MeasuredResults thisMeasuredResults, otherMeasuredResults;
if (!_measuredResultsReference.TryGetTarget(out thisMeasuredResults) ||
!scanProvider._measuredResultsReference.TryGetTarget(out otherMeasuredResults))
{
return(false);
}
if (!ReferenceEquals(thisMeasuredResults, otherMeasuredResults))
{
return(false);
}
_dataFile = scanProvider._dataFile;
_msDataFileScanIds = scanProvider._msDataFileScanIds;
_getMsDataFileScanIds = scanProvider._getMsDataFileScanIds;
scanProvider._dataFile = null;
return(true);
}
/// <summary>
/// Constructor.
/// </summary>
/// <param name="ScanProvider">Instanciated implementation of an IScanProvider.</param>
/// <param name="dorkToScan">A DorkDone, which represents the Dork to scan.</param>
public Scanner(IScanProvider ScanProvider, DorkDone dorkToScan)
{
scanProvider = ScanProvider;
_ScanStatus = (int)SCANTHREADSTATE.Waiting;
_DorkToScan = dorkToScan;
httpGet = null;
}
private void AdoptCachedProvider(IScanProvider scanProvider)
{
lock (this)
{
for (int i = 0; i < _cachedScanProviders.Count; i++)
{
if (scanProvider.Adopt(_cachedScanProviders[i]))
{
_oldScanProviders.Add(_cachedScanProviders[i]);
_cachedScanProviders.RemoveAt(i);
return;
}
}
}
}
public void UpdateScanProvider(IScanProvider scanProvider, int transitionIndex, int scanIndex)
{
ScanProvider.SetScanProvider(scanProvider);
if (scanProvider != null)
{
Source = scanProvider.Transitions[transitionIndex].Source;
Assume.IsTrue(Source == ScanProvider.Source);
TransitionIndex = transitionIndex;
ScanIndex = scanIndex;
FileName = scanProvider.DataFilePath.GetFileName();
}
else
{
MsDataSpectra = null;
FileName = null;
}
}
public bool Adopt(IScanProvider other)
{
if (!Equals(DocFilePath, other.DocFilePath) || !Equals(DataFilePath, other.DataFilePath))
{
return(false);
}
var scanProvider = other as ScanProvider;
if (scanProvider == null)
{
return(false);
}
_dataFile = scanProvider._dataFile;
_msDataFileScanIds = scanProvider._msDataFileScanIds;
_getMsDataFileScanIds = scanProvider._getMsDataFileScanIds;
scanProvider._dataFile = null;
return(true);
}
public void ShowSpectrum(IScanProvider scanProvider, int transitionIndex, int scanIndex)
{
_msDataFileScanHelper.UpdateScanProvider(scanProvider, transitionIndex, scanIndex);
if (scanProvider != null)
{
comboBoxScanType.Items.Clear();
foreach (var source in new[] { ChromSource.ms1, ChromSource.fragment, ChromSource.sim })
{
foreach (var transition in _msDataFileScanHelper.ScanProvider.Transitions)
{
if (transition.Source == source)
{
comboBoxScanType.Items.Add(_msDataFileScanHelper.NameFromSource(source));
break;
}
}
}
comboBoxScanType.SelectedIndexChanged -= comboBoxScanType_SelectedIndexChanged;
comboBoxScanType.SelectedItem = _msDataFileScanHelper.NameFromSource(_msDataFileScanHelper.Source);
comboBoxScanType.SelectedIndexChanged += comboBoxScanType_SelectedIndexChanged;
comboBoxScanType.Enabled = true;
LoadScan(true, true);
}
else
{
ClearGraph();
// No full scans can be displayed.
_graphHelper.SetErrorGraphItem(new UnavailableMSGraphItem());
}
UpdateUI(false);
}
public void ShowGraphFullScan(IScanProvider scanProvider, int transitionIndex, int scanIndex)
{
if (_graphFullScan != null)
{
_graphFullScan.Activate();
_graphFullScan.Focus();
}
else
{
_graphFullScan = CreateGraphFullScan();
// Choose a position to float the window
var rectFloat = GetFloatingRectangleForNewWindow();
_graphFullScan.Show(dockPanel, rectFloat);
}
_graphFullScan.ShowSpectrum(scanProvider, transitionIndex, scanIndex);
}
/// <summary>
/// Constructor.
/// </summary>
/// <param name="myScanProvider">Implementation of ISanProvider, to supply the needed keywords.</param>
public RequestBuilder(IScanProvider myScanProvider)
{
scanprovider = myScanProvider;
}
/// <summary>
/// Constructor.
/// </summary>
/// <param name="scanprovider">Implementation of IScanProvider.</param>
public ParseHtmlResults(IScanProvider scanprovider, int resultpage)
{
scanProvider = scanprovider;
currentResultPage = resultpage;
_blocked = false;
}
public bool Adopt(IScanProvider scanProvider)
{
return(false);
}
public ClickedChromatogramEventArgs(IScanProvider scanProvider, int transitionIndex, int scanIndex)
{
ScanProvider = scanProvider;
TransitionIndex = transitionIndex;
ScanIndex = scanIndex;
}
public bool Adopt(IScanProvider scanProvider)
{
return false;
}
/// <summary>
/// Constructor.
/// </summary>
/// <param name="ScanProvider">Instanciated implementation of an IScanProvider.</param>
public Scanner(IScanProvider ScanProvider)
{
scanProvider = ScanProvider;
_ScanStatus = (int)SCANTHREADSTATE.Waiting;
httpGet = null;
}
public bool Adopt(IScanProvider other)
{
if (!Equals(DocFilePath, other.DocFilePath) || !Equals(DataFilePath, other.DataFilePath))
return false;
var scanProvider = other as ScanProvider;
if (scanProvider == null)
return false;
_dataFile = scanProvider._dataFile;
_msDataFileScanIds = scanProvider._msDataFileScanIds;
_getMsDataFileScanIds = scanProvider._getMsDataFileScanIds;
scanProvider._dataFile = null;
return true;
}
