public static List <IAnnotatedGene> Annotate(IEnumerable <string> geneNames, IGeneAnnotationProvider geneAnnotationProvider)
{
var annotatedGenes = new List <IAnnotatedGene>();
foreach (var geneName in geneNames)
{
var annotation = geneAnnotationProvider.Annotate(geneName);
if (annotation != null)
{
annotatedGenes.Add(annotation);
}
}
return(annotatedGenes);
}
public IEnumerable <string> GetGeneAnnotations()
{
var geneAnnotations = new List <string>();
foreach (var gene in _affectedGenes.OrderBy(x => x))
{
var annotation = _geneAnnotationProvider.Annotate(gene);
if (string.IsNullOrEmpty(annotation))
{
continue;
}
geneAnnotations.Add(annotation);
}
return(geneAnnotations.Count > 0 ? geneAnnotations : null);
}
