public async Task IndexSnp(SnpSource source, Snp snp)
{
if (Genes == null)
{
Genes = await Database.GetAllGene();
}
var doi = source.Study?.Doi;
SnpData snpData = SnpData.FromSnp(snp);
if (doi != null)
{
var citation = await DoiClient.GetCitation(doi);
if (citation != null)
{
snpData.Annotations.Add(new SnpData.Annotation
{
Study = citation,
Lineage = snp.Attributes.GetValueOrDefault("lineage")
});
}
}
;
snpData = snpData with
{
Gene = Genes
.FirstOrDefault(v => v.Position <snp.Position && v.Position + v.Length> snp.Position)
};
await Database.Index(snpData);
}
