private bool IsIncluded(HalfLifeSettings halfLifeSettings, PeptideFileAnalysis peptideFileAnalysis)
{
if (!string.IsNullOrEmpty(Cohort))
{
if (Cohort != HalfLifeCalculator.GetCohort(peptideFileAnalysis.MsDataFile, GetHalfLifeSettings().BySample))
{
return(false);
}
}
if (peptideFileAnalysis.MsDataFile.TimePoint == null)
{
return(false);
}
if (IsTimePointExcluded(peptideFileAnalysis.MsDataFile.TimePoint.Value))
{
return(false);
}
if (halfLifeSettings.PrecursorPoolCalculation == PrecursorPoolCalculation.Individual)
{
if (null == peptideFileAnalysis.CalculatedPeaks || !peptideFileAnalysis.CalculatedPeaks.Turnover.HasValue)
{
return(false);
}
}
return(true);
}
private void UpdateCohortCombo()
{
var cohortSet = new HashSet <String> {
""
};
foreach (var msDataFile in Workspace.MsDataFiles)
{
cohortSet.Add(HalfLifeCalculator.GetCohort(msDataFile, GetHalfLifeSettings().BySample));
}
var selectedCohort = (string)comboCohort.SelectedItem;
var cohorts = new List <String>(cohortSet);
cohorts.Sort();
if (Lists.EqualsDeep(cohorts, comboCohort.Items))
{
return;
}
comboCohort.Items.Clear();
foreach (var cohort in cohorts)
{
comboCohort.Items.Add(cohort);
}
comboCohort.SelectedIndex = Math.Max(0, cohorts.IndexOf(selectedCohort));
}
