public GlycanStructure(Glycan argGlycan, MSPoint argPeak)
{
_tree = new GlycanTreeNode(argGlycan.GlycanType, _nextID);
_nextID++;
_y1 = argPeak;
_IUPAC = _tree.GetIUPACString();
}
public GlycanStructure(Glycan argGlycan, float argY1)
{
_tree = new GlycanTreeNode(argGlycan.GlycanType, _nextID);
_nextID++;
_y1 = new MSPoint(argY1, 0.0f);
_IUPAC = _tree.GetIUPACString();
}
public void AddGlycanToStructure(GlycanTreeNode argAddTree, int argParentID)
{
GlycanTreeNode Parent = GetGlycanTreeByID(argParentID);
if (Parent != null)
{
foreach (GlycanTreeNode GT in argAddTree.FetchAllGlycanNode())
{
GT.NodeID = _nextID;
_nextID++;
}
argAddTree.Parent = Parent;
Parent.AddGlycanSubTree(argAddTree);
// Parent.UpdateGlycans();
Parent.SortSubTree();
_IUPAC = _tree.GetIUPACString();
}
}
public void RemoveSubtree(GlycanTreeNode argTree, GlycanTreeNode argRemoveTree)
{
int TargetLevel = argRemoveTree.DistanceRoot;
GlycanTreeNode CurrentTree = argTree;
Queue ChildQuene = new Queue();
do
{
if (CurrentTree.DistanceRoot < TargetLevel)
{
if (CurrentTree.GetChildren() == null) //Other Branch
{
CurrentTree = (GlycanTreeNode)ChildQuene.Dequeue();
}
else
{
if (CurrentTree.GetChildren().Count > 1)
{
for (int i = 1; i < CurrentTree.GetChildren().Count; i++)
{
ChildQuene.Enqueue(CurrentTree.GetChildren()[i]);
}
}
CurrentTree = CurrentTree.GetChildren()[0];
}
}
else
{
if (CurrentTree.GetIUPACString() == argRemoveTree.GetIUPACString())
{
CurrentTree = CurrentTree.Parent;
CurrentTree.GetChildren().Remove(argRemoveTree);
}
}
} while (true);
}
public GlycanStructure(GlycanTreeNode argGlycan)
{
_tree = argGlycan;
_nextID = argGlycan.NoOfTotalGlycan + 1;
_IUPAC = _tree.GetIUPACString();
}
