/// <summary>
/// Copy constructor.
/// </summary>
/// <param name="copyFrom"></param>
public NeatParameters(NeatParameters copyFrom)
{
//joel
noveltySearch = copyFrom.noveltySearch;
noveltyHistogram = copyFrom.noveltyHistogram;
noveltyFixed = copyFrom.noveltyFixed;
noveltyFloat = copyFrom.noveltyFloat;
histogramBins = copyFrom.histogramBins;
populationSize = copyFrom.populationSize;
pOffspringAsexual = copyFrom.pOffspringAsexual;
pOffspringSexual = copyFrom.pOffspringSexual;
pInterspeciesMating = copyFrom.pInterspeciesMating;
pDisjointExcessGenesRecombined = copyFrom.pDisjointExcessGenesRecombined;
pMutateConnectionWeights = copyFrom.pMutateConnectionWeights;
pMutateAddNode = copyFrom.pMutateAddNode;
pMutateAddModule = copyFrom.pMutateAddModule;
pMutateAddConnection = copyFrom.pMutateAddConnection;
pMutateDeleteConnection = copyFrom.pMutateDeleteConnection;
pMutateDeleteSimpleNeuron = copyFrom.pMutateDeleteSimpleNeuron;
// Copy the list.
ConnectionMutationParameterGroupList = new ConnectionMutationParameterGroupList(copyFrom.ConnectionMutationParameterGroupList);
compatibilityThreshold = copyFrom.compatibilityThreshold;
compatibilityDisjointCoeff = copyFrom.compatibilityDisjointCoeff;
compatibilityExcessCoeff = copyFrom.compatibilityExcessCoeff;
compatibilityWeightDeltaCoeff = copyFrom.compatibilityWeightDeltaCoeff;
elitismProportion = copyFrom.elitismProportion;
selectionProportion = copyFrom.selectionProportion;
targetSpeciesCountMin = copyFrom.targetSpeciesCountMin;
targetSpeciesCountMax = copyFrom.targetSpeciesCountMax;
pruningPhaseBeginComplexityThreshold = copyFrom.pruningPhaseBeginComplexityThreshold;
pruningPhaseBeginFitnessStagnationThreshold = copyFrom.pruningPhaseBeginFitnessStagnationThreshold;
pruningPhaseEndComplexityStagnationThreshold = copyFrom.pruningPhaseEndComplexityStagnationThreshold;
speciesDropoffAge = copyFrom.speciesDropoffAge;
connectionWeightRange = copyFrom.connectionWeightRange;
}
/// <summary>
/// Default Constructor.
/// </summary>
public NeatParameters()
{
histogramBins = new List<int>();
noveltySearch = false;
noveltyHistogram = false;
noveltyFixed = false;
noveltyFloat = false;
populationSize = DEFAULT_POPULATION_SIZE;
pInitialPopulationInterconnections = DEFAULT_P_INITIAL_POPULATION_INTERCONNECTIONS;
pOffspringAsexual = DEFAULT_P_OFFSPRING_ASEXUAL;
pOffspringSexual = DEFAULT_P_OFFSPRING_SEXUAL;
pInterspeciesMating = DEFAULT_P_INTERSPECIES_MATING;
pDisjointExcessGenesRecombined = DEFAULT_P_DISJOINGEXCESSGENES_RECOMBINED;
// pMutateConnectionWeights = DEFAULT_P_MUTATE_CONNECTION_WEIGHTS;
// pMutateAddNode = DEFAULT_P_MUTATE_ADD_NODE;
// pMutateAddConnection = DEFAULT_P_MUTATE_ADD_CONNECTION;
// pMutateDeleteConnection = DEFAULT_P_MUTATE_DELETE_CONNECTION;
// pMutateDeleteSimpleNeuron = DEFAULT_P_MUTATE_DELETE_SIMPLENEURON;
//----- High level mutation proportions
pMutateConnectionWeights = DEFAULT_P_MUTATE_CONNECTION_WEIGHTS;
pMutateAddNode = DEFAULT_P_MUTATE_ADD_NODE;
pMutateAddModule = DEFAULT_P_MUTATE_ADD_MODULE;
pMutateAddConnection = DEFAULT_P_MUTATE_ADD_CONNECTION;
pMutateDeleteConnection = DEFAULT_P_MUTATE_DELETE_CONNECTION;
pMutateDeleteSimpleNeuron = DEFAULT_P_MUTATE_DELETE_SIMPLENEURON;
//----- Build a default ConnectionMutationParameterGroupList.
ConnectionMutationParameterGroupList = new ConnectionMutationParameterGroupList();
ConnectionMutationParameterGroupList.Add(new ConnectionMutationParameterGroup(0.125, ConnectionPerturbationType.JiggleEven, ConnectionSelectionType.Proportional, 0.5, 0, 0.05, 0.0));
ConnectionMutationParameterGroupList.Add(new ConnectionMutationParameterGroup(0.125, ConnectionPerturbationType.JiggleEven, ConnectionSelectionType.Proportional, 0.1, 0, 0.05, 0.0));
ConnectionMutationParameterGroupList.Add(new ConnectionMutationParameterGroup(0.125, ConnectionPerturbationType.JiggleEven, ConnectionSelectionType.FixedQuantity, 0.0, 1, 0.05, 0.0));
ConnectionMutationParameterGroupList.Add(new ConnectionMutationParameterGroup(0.5, ConnectionPerturbationType.Reset, ConnectionSelectionType.Proportional, 0.1, 0, 0.0, 0.0));
ConnectionMutationParameterGroupList.Add(new ConnectionMutationParameterGroup(0.125, ConnectionPerturbationType.Reset, ConnectionSelectionType.FixedQuantity, 0.0, 1, 0.0, 0.0));
//-----
compatibilityThreshold = DEFAULT_COMPATIBILITY_THRESHOLD;
compatibilityDisjointCoeff = DEFAULT_COMPATIBILITY_DISJOINT_COEFF;
compatibilityExcessCoeff = DEFAULT_COMPATIBILITY_EXCESS_COEFF;
compatibilityWeightDeltaCoeff = DEFAULT_COMPATIBILITY_WEIGHTDELTA_COEFF;
elitismProportion = DEFAULT_ELITISM_PROPORTION;
selectionProportion = DEFAULT_SELECTION_PROPORTION;
targetSpeciesCountMin = DEFAULT_TARGET_SPECIES_COUNT_MIN;
targetSpeciesCountMax = DEFAULT_TARGET_SPECIES_COUNT_MAX;
pruningPhaseBeginComplexityThreshold = DEFAULT_PRUNINGPHASE_BEGIN_COMPLEXITY_THRESHOLD;
pruningPhaseBeginFitnessStagnationThreshold = DEFAULT_PRUNINGPHASE_BEGIN_FITNESS_STAGNATION_THRESHOLD;
pruningPhaseEndComplexityStagnationThreshold = DEFAULT_PRUNINGPHASE_END_COMPLEXITY_STAGNATION_THRESHOLD;
speciesDropoffAge = DEFAULT_SPECIES_DROPOFF_AGE;
connectionWeightRange = DEFAULT_CONNECTION_WEIGHT_RANGE;
//DAVID
activationProbabilities = new double[4];
activationProbabilities[0] = DEFAULT_ACTIVATION_PROBABILITY;
activationProbabilities[1] = 0;
activationProbabilities[2] = 0;
activationProbabilities[3] = 0;
}
