//lib_GetEditorsChoiceCommentsCitationsForCommentByCommentID
public static PersonalizedMedicine_User DisplayPmids(int?UserID, string PMIDList, int?DisplayMode, byte?SearchSort)
{
using (Cogent3Entities entity = new Cogent3Entities())
{
PersonalizedMedicine_User result = null;
string query = "[ap_DisplayPMID] @UserID,@PMIDList,@DisplayMode,@SearchSort";
SqlParameter UserIDs = new SqlParameter("@UserID", UserID);
SqlParameter PMIDSlst = new SqlParameter("@PMIDList", PMIDList);
SqlParameter DisplayModes = new SqlParameter("@DisplayMode", DisplayMode);
SqlParameter SearchSorts = new SqlParameter("@SearchSort", SearchSort);
result = entity.Database.SqlQuery <PersonalizedMedicine_User>(query, UserIDs, PMIDSlst, DisplayModes, SearchSorts).FirstOrDefault();
return(result);
}
}
//
// GET: /mylibrary/
public ActionResult Index(int specid = 0, int oid = 0, int fid = 0, string selaction = null, string sort = "date", string searchfolder = "", string page = "", int start = 1)
{
int qsSpecId = specid;
MyLibraryModel MainMyLibraryModel = new MyLibraryModel();
var UserSpecialityList = MyLibraryBL.GetUserSpecialities(CurrentUser.UserId);
if (qsSpecId == 0)
{
qsSpecId = UserSpecialityList.Select(n => n.SpecialityId).FirstOrDefault();
}
var UserFolderList = MyLibraryBL.GetUserFolderList(qsSpecId, CurrentUser.UserId);
MainMyLibraryModel.AllUserFolders = UserFolderList;
MainMyLibraryModel.AllUserSpecialities = UserSpecialityList;
ViewBag.SpecId = qsSpecId;
ViewBag.PrimarySpecialityId = UserSpecialityList.Select(n => n.SpecialityId).FirstOrDefault();
// For Citation
if (selaction == "saved")
{
MainMyLibraryModel.Citations = MyLibraryBL.GetCitations(fid, CurrentUser.UserId);
if (MainMyLibraryModel.Citations.Count > 0)
{
MainMyLibraryModel.CitationDetails = MyLibraryBL.GetCitationDetails(MainMyLibraryModel.Citations, sort, CurrentUser.UserId, 2);
}
else
{
MainMyLibraryModel.CitationDetails = null;
}
}
else if (selaction == "editor")
{
MainMyLibraryModel.PMIDs = MyLibraryBL.GetEditorsChoicePMids(fid);
MainMyLibraryModel.Citations = MyLibraryBL.GetEditorsChoiceCitations(fid, CurrentUser.UserId);
if (MainMyLibraryModel.Citations.Count > 0)
{
MainMyLibraryModel.CitationDetails = MyLibraryBL.GetCitationDetails(MainMyLibraryModel.Citations, sort, CurrentUser.UserId, 2);
}
else
{
MainMyLibraryModel.CitationDetails = null;
}
}
else if (selaction == "seminal")
{
MainMyLibraryModel.PMIDs = MyLibraryBL.GetSeminalPMids(fid);
MainMyLibraryModel.Citations = MyLibraryBL.GetSeminalCitations(fid, CurrentUser.UserId);
if (MainMyLibraryModel.Citations.Count > 0)
{
MainMyLibraryModel.CitationDetails = MyLibraryBL.GetCitationDetails(MainMyLibraryModel.Citations, sort, CurrentUser.UserId, 2);
}
else
{
MainMyLibraryModel.CitationDetails = null;
}
}
else if (selaction == "sponsor")
{
MainMyLibraryModel.PMIDs = MyLibraryBL.GetSponsorPMids(fid);
MainMyLibraryModel.Citations = MyLibraryBL.GetSponsorCitations(fid, CurrentUser.UserId);
if (MainMyLibraryModel.Citations.Count > 0)
{
MainMyLibraryModel.CitationDetails = MyLibraryBL.GetCitationDetails(MainMyLibraryModel.Citations, sort, CurrentUser.UserId, 2);
}
else
{
MainMyLibraryModel.CitationDetails = null;
}
}
else if (selaction == "acr")
{
MainMyLibraryModel.AcrDocumentsMyLibraryList = MyLibraryBL.getAcrDocumentsList(fid);
}
if (!string.IsNullOrEmpty(searchfolder))
{
MainMyLibraryModel.CitationDetails = MainMyLibraryModel.CitationDetails.Where(c => c.pmid.ToString() == searchfolder || (c.AuthorList ?? "").Contains(searchfolder) || (c.ArticleTitle ?? "").Contains(searchfolder) || (c.MedlinePgn ?? "").Contains(searchfolder) || (c.MedlineTA ?? "").Contains(searchfolder)).ToList();
}
if (MainMyLibraryModel.CitationDetails != null)
{
MainMyLibraryModel.CitationDetailsTotal = MainMyLibraryModel.CitationDetails;
MainMyLibraryModel.CitationDetails = MainMyLibraryModel.CitationDetailsTotal.Skip(start - 1).Take(25).ToList();
using (Cogent3Entities entity = new Cogent3Entities())
{
foreach (var item in MainMyLibraryModel.CitationDetails)
{
if ((!item.unicodeFixed.HasValue) || (item.unicodeFixed == false))
{
if ((item.ArticleTitle ?? "").Contains("?") || (item.ArticleTitle ?? "").Contains("="))
{
List <string> ArticleTitleWithNoIssue = MyLibraryBL.GetAbstractWithNoIssue(item.pmid);
if (ArticleTitleWithNoIssue.Count == 2)
{
item.ArticleTitle = ArticleTitleWithNoIssue[1];
int PMID = Convert.ToInt32(item.pmid);
var IwideTable = (from iw in entity.iWides where iw.PMID == item.pmid select iw).FirstOrDefault();
if (IwideTable != null)
{ //AbstractArticleTitleNew[0] is for Abstract Text and AbstractArticleTitleNew[1] is for Article Title;;
item.ArticleTitle = ArticleTitleWithNoIssue[1];
IwideTable.ArticleTitle = ArticleTitleWithNoIssue[1];
entity.Entry(IwideTable).State = EntityState.Modified;
}
var IwideNewTable = (from iw in entity.iWideNews where iw.PMID == item.pmid select iw).FirstOrDefault();
if (IwideNewTable != null)
{
item.ArticleTitle = ArticleTitleWithNoIssue[1];
IwideNewTable.ArticleTitle = ArticleTitleWithNoIssue[1];
entity.Entry(IwideNewTable).State = EntityState.Modified;
}
}
}
}
}
entity.SaveChanges();
}
}
return(View(MainMyLibraryModel));
}
// To Get Citation Details
public static List <CitationDetailsModel> GetCitationDetails(List <CitationsModel> CitationsPmids, string sort, int UserId, int displayMode, bool isAbstract = false)
{
using (Cogent3Entities entity = new Cogent3Entities())
{
StringBuilder str = new StringBuilder();
foreach (var item in CitationsPmids)
{
str.Append(item.pmid + ",");
}
// For sort order
short sortorder = 1;
switch (sort)
{
case "date":
sortorder = 1;
break;
case "authors":
sortorder = 2;
break;
case "title":
sortorder = 3;
break;
case "journal":
sortorder = 4;
break;
default:
sortorder = 1;
break;
}
string PMIDList = str.ToString();
if (!string.IsNullOrEmpty(PMIDList))
{
PMIDList = PMIDList.Remove(PMIDList.LastIndexOf(','), 1);
}
string query = "[ap_DisplayPMID_AJA_Dev] @UserID,@PMIDList,@DisplayMode,@SearchSort";
SqlParameter UserID = new SqlParameter("@UserID", UserId);
SqlParameter Pmids = new SqlParameter("@PMIDList", PMIDList);
SqlParameter DisplayMode = new SqlParameter("@DisplayMode", displayMode);
SqlParameter SearchSort = new SqlParameter("@SearchSort", sortorder);
var AllCitationDetails = entity.Database.SqlQuery <CitationDetailsModel>(query, UserID, Pmids, DisplayMode, SearchSort).ToList();
if (isAbstract)
{
try
{
string query1 = "[ap_DisplayPMID_AJA_Dev_Detailed] @UserID,@PMIDList,@DisplayMode,@SearchSort";
SqlParameter UserID1 = new SqlParameter("@UserID", UserId);
SqlParameter Pmids1 = new SqlParameter("@PMIDList", PMIDList);
SqlParameter DisplayMode1 = new SqlParameter("@DisplayMode", displayMode);
SqlParameter SearchSort1 = new SqlParameter("@SearchSort", sortorder);
var AllCitationDetailsDetailed = entity.Database.SqlQuery <CitationDetailsModelDetail>(query1, UserID1, Pmids1, DisplayMode1, SearchSort1).ToList();
AllCitationDetails[0].AuthorList = "";
foreach (var item in AllCitationDetailsDetailed)
{
AllCitationDetails[0].AuthorList += item.DisplayName + ", ";
}
AllCitationDetails[0].AuthorList = AllCitationDetails[0].AuthorList.Substring(0, AllCitationDetails[0].AuthorList.LastIndexOf(','));
if ((!AllCitationDetails[0].unicodeFixed.HasValue) || AllCitationDetails[0].unicodeFixed == false)
{
List <string> AbstractArticleTitleNew = GetAbstractWithNoIssue(AllCitationDetails[0].pmid);
if (AbstractArticleTitleNew.Count == 2)
{
int PMID = Convert.ToInt32(AllCitationDetails[0].pmid);
var IwideTable = (from iw in entity.iWides where iw.PMID == PMID select iw).FirstOrDefault();
if (IwideTable != null)
{
AllCitationDetails[0].AbstractText = AbstractArticleTitleNew[0]; //AbstractArticleTitleNew[0] is for Abstract Text and AbstractArticleTitleNew[1] is for Article Title;;
IwideTable.AbstractText = AbstractArticleTitleNew[0];
AllCitationDetails[0].ArticleTitle = AbstractArticleTitleNew[1];
IwideTable.ArticleTitle = AbstractArticleTitleNew[1];
IwideTable.unicodeFixed = true;
entity.Entry(IwideTable).State = EntityState.Modified;
}
var IwideNewTable = (from iw in entity.iWideNews where iw.PMID == PMID select iw).FirstOrDefault();
if (IwideNewTable != null)
{
AllCitationDetails[0].AbstractText = AbstractArticleTitleNew[0];
IwideNewTable.AbstractText = AbstractArticleTitleNew[0];
AllCitationDetails[0].ArticleTitle = AbstractArticleTitleNew[1];
IwideNewTable.ArticleTitle = AbstractArticleTitleNew[1];
IwideNewTable.unicodeFixed = true;
entity.Entry(IwideNewTable).State = EntityState.Modified;
}
}
}
entity.SaveChanges();
}
catch (Exception)
{
}
}
List <CitationDetailsModel> NonMedLineCitationsList = AllCitationDetails.Where(u => string.IsNullOrEmpty(u.ArticleTitle)).ToList();
foreach (var item in NonMedLineCitationsList)
{
using (EditorsEntities entityNM = new EditorsEntities())
{
CitationDetailsModel NMCitation = NonMedLineCitationsList.Find(u => u.pmid == item.pmid);
if (NMCitation != null)
{
NMCitation = (from nm in entityNM.NonMedlineCitations
where nm.PMID == NMCitation.pmid
select new CitationDetailsModel
{
AbstractText = nm.Abstract,
ArticleTitle = nm.ArticleTitle,
AuthorList = nm.AuthorList,
DisplayDate = nm.DisplayDate,
DisplayNotes = nm.DisplayNotes,
MedlinePgn = nm.MedlinePgn,
MedlineTA = nm.MedlineTA,
StatusDisplay = nm.StatusDisplay,
pmid = nm.PMID
}).FirstOrDefault();
if (NMCitation != null)
{
int Index = AllCitationDetails.FindIndex(u => u.pmid == item.pmid);
AllCitationDetails.RemoveAt(Index);
AllCitationDetails.Insert(Index, NMCitation);
}
}
}
}
return(AllCitationDetails);
}
}
