public static void ExpandProfileFile(string inputfile, string outputfile)
{
var source = new CachedArtifactSource(ArtifactResolver.CreateOffline());
var expander = new ProfileExpander(source);
string xml = File.ReadAllText(inputfile);
var diff = (Profile)FhirParser.ParseResourceFromXml(xml);
expander.Expand(diff);
xml = FhirSerializer.SerializeResourceToXml(diff);
File.WriteAllText(outputfile, xml);
}
public static void ExpandProfileFile(string inputfile, string outputfile)
{
var source = ArtifactResolver.CreateOffline();
//var source = new CachedArtifactSource(ArtifactResolver.CreateOffline());
var expander = new SnapshotGenerator(source);
string xml = File.ReadAllText(inputfile);
var diff = (new FhirXmlParser()).Parse <StructureDefinition>(xml);
expander.Generate(diff);
xml = FhirSerializer.SerializeResourceToXml(diff);
File.WriteAllText(outputfile, xml);
}
public void SetupSource()
{
source = ArtifactResolver.CreateOffline();
}
public static OperationOutcome ValidateEntry(ResourceEntry entry)
{
OperationOutcome result = new OperationOutcome();
result.Issue = new List <OperationOutcome.OperationOutcomeIssueComponent>();
ICollection <ValidationResult> vresults = new List <ValidationResult>();
// Phase 1, validate against low-level rules built into the FHIR datatypes
// todo: The API no longer seems to have the FhirValidator class.
/*
* (!FhirValidator.TryValidate(entry.Resource, vresults, recurse: true))
* {
* foreach (var vresult in vresults)
* result.Issue.Add(createValidationResult("[.NET validation] " + vresult.ErrorMessage, vresult.MemberNames));
* }
*/
// Phase 2, validate against the XML schema
var xml = FhirSerializer.SerializeResourceToXml(entry.Resource);
var doc = XDocument.Parse(xml);
doc.Validate(SchemaCollection.ValidationSchemaSet, (source, args) => result.Issue.Add(createValidationResult("[XSD validation] " + args.Message, null)));
// Phase 3, validate against a profile, if present
var profileTags = entry.GetAssertedProfiles();
if (profileTags.Count() == 0)
{
// If there's no profile specified, at least compare it to the "base" profile
string baseProfile = CoreZipArtifactSource.CORE_SPEC_PROFILE_URI_PREFIX + entry.Resource.GetCollectionName();
profileTags = new Uri[] { new Uri(baseProfile, UriKind.Absolute) };
}
var artifactSource = ArtifactResolver.CreateOffline();
var specProvider = new SpecificationProvider(artifactSource);
foreach (var profileTag in profileTags)
{
var specBuilder = new SpecificationBuilder(specProvider);
specBuilder.Add(StructureFactory.PrimitiveTypes());
specBuilder.Add(StructureFactory.MetaTypes());
specBuilder.Add(StructureFactory.NonFhirNamespaces());
specBuilder.Add(profileTag.ToString());
specBuilder.Expand();
string path = Directory.GetCurrentDirectory();
var spec = specBuilder.ToSpecification();
var nav = doc.CreateNavigator();
nav.MoveToFirstChild();
Report report = spec.Validate(nav);
var errors = report.Errors;
foreach (var error in errors)
{
result.Issue.Add(createValidationResult("[Profile validator] " + error.Message, null));
}
}
if (result.Issue.Count == 0)
{
return(null);
}
else
{
return(result);
}
}
