public static async Task <Guid> UploadBlob(this ChemicalFileParserTestHarness harness, string bucket, string fileName)
{
var filePath = Path.Combine(Directory.GetCurrentDirectory(), "Resources", fileName);
var source = new FileStream(filePath, FileMode.Open);
return(await harness.BlobStorage.AddFileAsync(fileName, source, "application/octet-stream", bucket));
}
public EmptyMolTests(ChemicalFileParserTestHarness harness, ITestOutputHelper output, EmptyMolTestFixture initFixture) : base(harness, output)
{
Id = initFixture.Id;
CorrelationId = initFixture.CorrelationId;
Bucket = initFixture.Bucket;
UserId = initFixture.UserId;
}
public ValidCdxWithOneInvalidRecordTests(ChemicalFileParserTestHarness harness, ITestOutputHelper output, ValidCdxWithOneInvalidRecordTestFixture initFixture) : base(harness, output)
{
Id = initFixture.Id;
CorrelationId = initFixture.CorrelationId;
Bucket = initFixture.Bucket;
UserId = initFixture.UserId;
}
public ChemicalFileParserTest(ChemicalFileParserTestHarness fixture, ITestOutputHelper output = null)
{
Harness = fixture;
if (output != null)
{
Log.Logger = new LoggerConfiguration()
.MinimumLevel.Debug()
.WriteTo
.TestOutput(output, LogEventLevel.Verbose)
.CreateLogger()
.ForContext <ChemicalFileParserTest>();
}
}
public static async Task ParseFile(this ChemicalFileParserTestHarness harness, Guid id, Guid blobId, string bucket, Guid userId, Guid correlationId)
{
await harness.BusControl.Publish <ParseFile>(new
{
Id = id,
UserId = userId,
BlobId = blobId,
Bucket = bucket,
CorrelationId = correlationId
});
if (!harness.Received.Select <FileParsed>(m => m.Context.Message.CorrelationId == correlationId).Any() && !harness.Received.Select <FileParseFailed>(m => m.Context.Message.CorrelationId == correlationId).Any())
{
throw new TimeoutException();
}
}
public EmptyMolTestFixture(ChemicalFileParserTestHarness harness)
{
Bucket = UserId.ToString();
BlobId = harness.UploadBlob(Bucket, "empty.mol").Result;
harness.ParseFile(Id, BlobId, Bucket, UserId, CorrelationId).Wait();
}
public NonCdxTestFixture(ChemicalFileParserTestHarness harness)
{
Bucket = UserId.ToString();
BlobId = harness.UploadBlob(Bucket, "non-cdx.cdx").Result;
harness.ParseFile(Id, BlobId, Bucket, UserId, CorrelationId).Wait();
}
public ValidSdfTestFixture(ChemicalFileParserTestHarness harness)
{
Bucket = UserId.ToString();
BlobId = harness.UploadBlob(Bucket, "DrugBank_10.sdf").Result;
harness.ParseFile(Id, BlobId, Bucket, UserId, CorrelationId).Wait();
}
public ValidCdxWithOneInvalidRecordTestFixture(ChemicalFileParserTestHarness harness)
{
Bucket = UserId.ToString();
BlobId = harness.UploadBlob(Bucket, "10000_10Mos.cdx").Result;
harness.ParseFile(Id, BlobId, Bucket, UserId, CorrelationId).Wait();
}
