/// <summary>
/// Build a data grid interface for updating in bulk
/// </summary>
private void BuildBulkEditForm()
{
string postedSpecimens = Request.Form["specimens"] + "";
IEnumerable <int> specimenIds = postedSpecimens.Split(',').Select(s => int.Parse(s));
// get a list of Specimens
List <Specimen> specimens = new List <Specimen>();
foreach (int specimenId in specimenIds)
{
Specimen specimen = new Specimen();
specimen.Get(specimenId);
specimens.Add(specimen);
}
// data bind
DataView specimenDataView = specimens.AsDataView <Specimen>();
BulkEditGrid.DataSource = specimenDataView;
BulkEditGrid.DataBind();
// adjust UI
int startIndex = 3; // exclude required columns
int endIndex = BulkEditGrid.Columns.Count - 1; // exclude date column
var showIndexes = EVENT_TYPE_INDEXES[InventoryMode];
for (int i = startIndex; i < endIndex; i++)
{
BulkEditGrid.Columns[i].Visible = showIndexes.Contains(i);
}
}
public static double CountValueOfTheFunction(FactoryController factory, Specimen specimen)
{
double Payouts = 0;
double FactoryProfit = FactoryProfitCounter(factory);
foreach (KeyValuePair <Machines, Employees> e in specimen.Genome)
{
double val = 0;
for (int i = 0; i < e.Value.VectorOfAbilities.Length; i++)
{
if (e.Value.VectorOfAbilities[i] == '1')
{
val++;
}
}
if (e.Key.Special == 1)
{
Payouts += (val * 5) * 1.5;
}
else
{
Payouts += (val * 5);
}
}
return(FactoryProfit - Payouts);
}
private void specimenfillreport()
{
if (txtDocno.Text != "" && DDLsubconfirmid.SelectedItem.Value != "")
{
if (txtDocno.Text.ToString() == "")
{
MessageBox("Require Document No.");
}
try
{
DataTable dt = new DataTable();
dt = Specimen.Get_SpecimenDetailsForInvoice(Convert.ToInt32(txtDocno.Text.ToString()), Convert.ToDecimal(DDLsubconfirmid.SelectedItem.Value.ToString())).Tables[0];
if (dt.Rows.Count > 0)
{
ReportDocument CR = new ReportDocument();
CR.Load(Server.MapPath("Report/SpecimenReport.rpt"));
CR.SetDataSource(dt);
crtspecimen.ReportSource = CR;
}
//else
//{
// MessageBox("No Records Found");
// txtDocno.Focus();
//}
}
catch { }
}
}
public SpecimenDTO createAndPersistDTOAsync(CreateSpecimenDTO dto)
{
Specimen result = specimenFactory.create(dto);
Document document = specimenRepository.Save(result);
return(specimenFactory.createDTO(document));
}
public string EditSpecimen(DtoSpecimen dtoSpecimen)
{
var uniqueSpecimen = SpecimenMethods.Instance.GetSpecimenByCode(dtoSpecimen.Code);
if (!dtoSpecimen.IsEdit)
{
var specimen = new Specimen()
{
Code = dtoSpecimen.Code,
Name = dtoSpecimen.Name,
DefaultTube = new Tube()
{
Code = dtoSpecimen.DefaultTube.Code
}
};
return(SpecimenMethods.Instance.InsertSpecimen(specimen));
}
else
{
var specimen = new Specimen()
{
Id = uniqueSpecimen.Id,
Code = dtoSpecimen.Code,
Name = dtoSpecimen.Name,
DefaultTube = new Tube()
{
Code = dtoSpecimen.DefaultTube.Code
}
};
return(SpecimenMethods.Instance.UpdateSpecimen(specimen));
}
}
public override IDeepCopyable CopyTo(IDeepCopyable other)
{
var dest = other as ItemComponent;
if (dest != null)
{
base.CopyTo(dest);
if (Code != null)
{
dest.Code = (Hl7.Fhir.Model.CodeableConcept)Code.DeepCopy();
}
if (Specimen != null)
{
dest.Specimen = new List <Hl7.Fhir.Model.ResourceReference>(Specimen.DeepCopy());
}
if (BodySite != null)
{
dest.BodySite = (Hl7.Fhir.Model.CodeableConcept)BodySite.DeepCopy();
}
if (StatusElement != null)
{
dest.StatusElement = (Code <Hl7.Fhir.Model.DiagnosticOrder.DiagnosticOrderStatus>)StatusElement.DeepCopy();
}
if (Event != null)
{
dest.Event = new List <Hl7.Fhir.Model.DiagnosticOrder.EventComponent>(Event.DeepCopy());
}
return(dest);
}
else
{
throw new ArgumentException("Can only copy to an object of the same type", "other");
}
}
private Specimen GetRandomSpecimen()
{
if (EnableLookup)
{
if (_EtalonSpecimen == null)
{
_EtalonSpecimen = Lookup[UnityEngine.Random.Range(0, Lookup.Length)];
}
var result = new Specimen()
{
Angle = _EtalonSpecimen.Angle, Force = _EtalonSpecimen.Force, Parent = this
};
Mutate(ref result, 0.05f);
return(result);
}
else
{
return(new Specimen()
{
Angle = UnityEngine.Random.Range(-Settings.MaxAngle, Settings.MaxAngle),
Force = UnityEngine.Random.Range(MinEstimatedForce, MaxEstimatedForce),
Parent = this
});
}
}
private void move()
{
for (int i = specimens.Count - 1; i >= 0; i--)
{
Specimen s = specimens[i];
if (s.age == consts.maxAge)
{
specimens.RemoveAt(i);
continue;
}
s.age++;
int ox, oy;
plyr.pd.Invoke(b.getView(s.pos.x, s.pos.y), s.g, rnd, out ox, out oy);
Board.Position npos;
SpecimenState sstate = b.move(s.pos, ox, oy, out npos);
s.pos = npos;
if (sstate == SpecimenState.Win)
{
s.score++;
plyr.score++;
resetSpecimen(s);
}
else if (sstate == SpecimenState.Dead)
{
specimens.RemoveAt(i);
}
}
}
/// <inheritdoc/>
public string ToDelimitedString()
{
CultureInfo culture = CultureInfo.CurrentCulture;
return(string.Format(
culture,
StringHelper.StringFormatSequence(0, 19, Configuration.FieldSeparator),
Id,
SequenceNumberTestObservationMasterFile.HasValue ? SequenceNumberTestObservationMasterFile.Value.ToString(Consts.NumericFormat, culture) : null,
DerivedSpecimen,
ContainerDescription != null ? string.Join(Configuration.FieldRepeatSeparator, ContainerDescription.Select(x => x.ToDelimitedString())) : null,
ContainerVolume != null ? string.Join(Configuration.FieldRepeatSeparator, ContainerVolume.Select(x => x.ToString(Consts.NumericFormat, culture))) : null,
ContainerUnits != null ? string.Join(Configuration.FieldRepeatSeparator, ContainerUnits.Select(x => x.ToDelimitedString())) : null,
Specimen?.ToDelimitedString(),
Additive?.ToDelimitedString(),
Preparation?.ToDelimitedString(),
SpecialHandlingRequirements?.ToDelimitedString(),
NormalCollectionVolume?.ToDelimitedString(),
MinimumCollectionVolume?.ToDelimitedString(),
SpecimenRequirements?.ToDelimitedString(),
SpecimenPriorities != null ? string.Join(Configuration.FieldRepeatSeparator, SpecimenPriorities) : null,
SpecimenRetentionTime?.ToDelimitedString(),
SpecimenHandlingCode != null ? string.Join(Configuration.FieldRepeatSeparator, SpecimenHandlingCode.Select(x => x.ToDelimitedString())) : null,
SpecimenPreference,
PreferredSpecimenAttribtureSequenceId.HasValue ? PreferredSpecimenAttribtureSequenceId.Value.ToString(Consts.NumericFormat, culture) : null,
TaxonomicClassificationCode != null ? string.Join(Configuration.FieldRepeatSeparator, TaxonomicClassificationCode.Select(x => x.ToDelimitedString())) : null
).TrimEnd(Configuration.FieldSeparator.ToCharArray()));
}
public Dictionary <int, InstructionsHelper> GenerateData(CargoShipCollection ships, ref ContainersCollection containers)
{
this._ships = ships;
this._containers = containers;
Dictionary <int, InstructionsHelper> Solution = new Dictionary <int, InstructionsHelper>();
InitialFill();
log.Debug("Initial fill");
for (var i = 0; i < cycles; ++i)
{
EvaluateSpecimens();
Crossover();
}
log.Debug("Mutation and crossover done");
Specimen bestSpec = _specimens[0];
for (var i = 0; i < _ships.Count; ++i)
{
Solution.Add(i, bestSpec._shipCargo[i]);
}
log.Debug("Solution created");
return(Solution);
}
public Tuple <Specimen, Specimen> GetChildren()
{
var childSpecimen1 = new Specimen(Data, Child1);
var childSpecimen2 = new Specimen(Data, Child2);
return(Tuple.Create(childSpecimen1, childSpecimen2));
}
public static List<Specimen> Crossover(this Specimen current, Specimen other)
{
if (current.Length != other.Length)
{
throw new ArgumentException("Specimens must have the same length of the genome!");
}
int pos = RndInteger.Next(current.Length - 3) + 2;
var child1 = default(Specimen);
child1.Fitness = double.NaN;
var child2 = default(Specimen);
child2.Fitness = double.NaN;
var child3 = default(Specimen);
child3.Fitness = double.NaN;
var genes1 = new double[current.Length];
var genes2 = new double[current.Length];
var genes3 = new double[current.Length];
for (int i = 0; i < current.Length; i++)
{
genes1[i] = (i < pos) ? current.Genes[i] : other.Genes[i];
genes2[i] = (i >= pos) ? current.Genes[i] : other.Genes[i];
genes3[i] = 0.5 * (current.Genes[i] + other.Genes[i]);
}
SetGenes(ref child1, genes1);
SetGenes(ref child2, genes2);
SetGenes(ref child3, genes3);
return new List<Specimen> { child1, child2, child3 };
}
private void AddSpecimensToCollection(int colId, string specimenIds, bool isNewCollection)
{
if (!string.IsNullOrEmpty(specimenIds))
{
char[] delimiters = { ',' };
string[] ids = specimenIds.Split(new char[] { ',' });
this.numOfSpecimensAdded = ids.GetLength(0);
//get each specimen by id and set its collectionId
foreach (string sId in ids)
{
Specimen biz = new Specimen();
Specimen_SpecimenCollections bizcol = new Specimen_SpecimenCollections();
biz.Get(int.Parse(sId));
//biz[Specimen.CollectionId] = colId;
//biz[Specimen.SpecimenStatus] = "Unavailable: Reserved"; //bug fix
//biz.Save();
if (!SpecimenCollectionExists(int.Parse(sId), colId))
{
bizcol[Specimen_SpecimenCollections.SpecimenId] = sId;
bizcol[Specimen_SpecimenCollections.CollectionId] = colId;
bizcol.Save();
}
BindSpecimensGrid();
}
LoadExistingCollection(colId, isNewCollection);
}
}
/// <summary>
/// btnNewSpecimen Click event.
/// Clears the Page for a new Specimen.
/// </summary>
/// <param name="sender">Sender.</param>
/// <param name="e">E.</param>
public void btnNewSpecimen_Clicked(object sender, EventArgs e)
{
specimen = new Specimen();
entryFieldID.Text = "";
entryOccurrenceNotes.Text = "";
entrySubstrate.Text = "";
pickerLifeStage.SelectedItem = null;
switchCultivated.IsToggled = false;
entryIndivCount.Text = "";
lblStatusMessage.IsVisible = false;
lblStatusMessage.Text = "";
specimen.SiteName = site.SiteName;
if (DataFunctions.CheckExists(specimen, site.RecordNo.ToString() + "-" + AppVariables.CollectionCount.ToString()))
{
Title = site.RecordNo.ToString() + "-" + (AppVariables.CollectionCount + 1).ToString();
}
else
{
Title = site.RecordNo.ToString() + "-" + AppVariables.CollectionCount.ToString();
}
}
private void fillcutomerreport()
{
if (txtfromDate.Text != "" && txttoDate.Text != "" && DDLSalesman.SelectedItem.Value != "")
{
string from = txtfromDate.Text.Split('/')[1] + "/" + txtfromDate.Text.Split('/')[0] + "/" + txtfromDate.Text.Split('/')[2];
string To = txttoDate.Text.Split('/')[1] + "/" + txttoDate.Text.Split('/')[0] + "/" + txttoDate.Text.Split('/')[2];
fdate = Convert.ToDateTime(from);
tdate = Convert.ToDateTime(To);
if (fdate > tdate)
{
MessageBox("From Date is Greater than ToDate");
txtfromDate.Focus();
}
else
{
try
{
DataTable dt = new DataTable();
dt = Specimen.Get_Customer_SalesmanwiseBooks(DDLSalesman.SelectedItem.Value.ToString(), Convert.ToDateTime(from), Convert.ToDateTime(To)).Tables[0];
ReportDocument CR = new ReportDocument();
CR.Load(Server.MapPath("Report/Salesmen_Customerwise_Report.rpt"));
CR.SetDataSource(dt);
crystalreportviewer1.ReportSource = CR;
}
catch { }
}
}
}
protected void btnPrint_Click(object sender, EventArgs e)
{
((Button)(sender)).Enabled = false;
SpecimenConfirmQtyDetails _objSpecimenConfirmQtyDetails = new SpecimenConfirmQtyDetails();
Specimen _objspecimen = new Specimen();
try
{
_objSpecimenConfirmQtyDetails.IsPrintInvoice = true;
_objSpecimenConfirmQtyDetails.CreatedBy = Session["UserName"].ToString();
_objSpecimenConfirmQtyDetails.SubDocId = Convert.ToDecimal(((Button)(sender)).CommandArgument.Trim());
_objSpecimenConfirmQtyDetails.Save_Specimen_PrintInvoiceDetails();
((Button)(sender)).BackColor = System.Drawing.Color.Red;
((Button)(sender)).ForeColor = System.Drawing.Color.White;
((Button)(sender)).Enabled = true;
ScriptManager.RegisterClientScriptBlock(Page, Page.GetType(), "window", "f_open_window_max('print/PrintInvoiceReport.aspx?d=" + txtDocno.Text.Trim() + "&sd=" + ((Button)(sender)).CommandArgument.Trim() + "')", true);
}
catch (Exception ex)
{
MessageBox(ex.Message.ToString());
((Button)(sender)).Enabled = true;
}
//}
}
public int UpdateSpecimenCondition(int specimenId, string condition)
{
Specimen biz = new Specimen();
biz.Get(specimenId);
string notes = biz[Specimen.SpecimenNotes].ToString();
if (!string.IsNullOrEmpty(condition) && GetSpecimenCondition(notes) != condition)
{
string updatedNotes = notes;
bool found = false;
foreach (string conditionValue in conditions)
{
if (updatedNotes.Contains(conditionValue))
{
updatedNotes = updatedNotes.Replace(conditionValue, condition);
found = true;
break;
}
}
if (found == false)
{
updatedNotes = updatedNotes + (updatedNotes == "" ? "" : " ") + condition;
}
if (notes != updatedNotes)
{
biz[Specimen.SpecimenNotes] = updatedNotes;
biz.Save();
}
}
return((int)biz[Specimen.SpecimenId]);
}
public static Specimen GetSpecimen(Patient patient, Organization orderOrganization)
{
var specimen = new Specimen
{
Id = Guid.NewGuid().ToString(),
Collection = new Specimen.SpecimenCollectionComponent
{
Collected = new Date(DateTime.Today.ToString(CultureInfo.CurrentCulture))
},
Type = new CodeableConcept(Systems.BIOMATERIAL, Guid.NewGuid().ToString()),
Container = new List <Specimen.SpecimenContainerComponent>
{
new Specimen.SpecimenContainerComponent
{
Identifier = new List <Identifier>
{
new Identifier(Systems.ORGANIZATIONS, GetCodeBySystem(Systems.ORGANIZATIONS))
{
Assigner = FhirHelper.CreateReference(orderOrganization)
}
},
Type = new CodeableConcept(Systems.CONTAINER_TYPE, Guid.NewGuid().ToString())
}
},
Subject = FhirHelper.CreateReference(patient)
};
return(specimen);
}
protected void btnemployee_Click(object sender, EventArgs e)
{
Rptrpending.DataSource = Specimen.Get_PendingDocNo("salesman", System.DateTime.Now, System.DateTime.Now, Convert.ToInt32(strFY), DDLEmployee.SelectedValue.ToString());
Rptrpending.DataBind();
pnlconfirm.Visible = true;
pnlDetails.Visible = false;
upOrderNO.Update();
}
public async Task <bool> RemoveSpecimenAsync(Specimen specimen)
{
var result = await _httpClient.DeleteAsync($"/api/specimen/{specimen.SpecimenId}");
_ = await ReadResult(result);
return(true);
}
/// <summary>
/// Initializes a new instance of the <see cref="T:collnotes.SpecimenPage"/> class.
/// Create Constructor. Takes the Site to add a Specimen under as an argument.
/// </summary>
/// <param name="site">Site.</param>
public SpecimenPage(Site site)
{
specimen = new Specimen();
this.site = site;
InitializeComponent();
Title = (AppVariables.CollectionCount > 0) ? site.RecordNo.ToString() + "-" + (AppVariables.CollectionCount + 1).ToString() : Title = site.RecordNo.ToString() + "-1";
btnBack.IsVisible = userIsEditing;
}
private void SetPopulation()
{
if ((CDTimeLeft - Time.fixedDeltaTime - 2.5f * Settings.DampAngleTime) < 0 && _PlannedSpecimen == null)
{
_PlannedSpecimen = GetNextPlanned();
SetSpecimen(_PlannedSpecimen);
}
}
public void BindCrist()
{
if (txtfromDate.Text != "" || txttoDate.Text != "")
{
if (txtBook.Text != "")
{
string from = txtfromDate.Text.Split('/')[1] + "/" + txtfromDate.Text.Split('/')[0] + "/" + txtfromDate.Text.Split('/')[2];
string To = txttoDate.Text.Split('/')[1] + "/" + txttoDate.Text.Split('/')[0] + "/" + txttoDate.Text.Split('/')[2];
string BookCode = txtBook.Text.Split(':')[0].Trim();
string bookCode2 = "null";
// bookname = txtBook.Text.Split(':')[2].Trim();
fdate = Convert.ToDateTime(from);
tdate = Convert.ToDateTime(To);
if (fdate > tdate)
{
MessageBox("From Date is Greater than ToDate");
txtfromDate.Focus();
}
else
{
DataTable dt = new DataTable();
dt = Specimen.Get_SpecimenDetailsForInvoice_Bookwise(bookCode2, BookCode, Convert.ToDateTime(from), Convert.ToDateTime(To)).Tables[0];
ReportDocument CR = new ReportDocument();
CR.Load(Server.MapPath("Report/BookWiseReport.rpt"));
cryBookwise.SeparatePages = false;
CR.SetDataSource(dt);
cryBookwise.ReportSource = CR;
}
}
else
{
string from = txtfromDate.Text.Split('/')[1] + "/" + txtfromDate.Text.Split('/')[0] + "/" + txtfromDate.Text.Split('/')[2];
string To = txttoDate.Text.Split('/')[1] + "/" + txttoDate.Text.Split('/')[0] + "/" + txttoDate.Text.Split('/')[2];
string BookCode = "null";
//txtBook.Text.Split(':')[0].Trim();
string bookCode2 = "null";
// bookname = txtBook.Text.Split(':')[2].Trim();
fdate = Convert.ToDateTime(from);
tdate = Convert.ToDateTime(To);
if (fdate > tdate)
{
MessageBox("From Date is Greater than ToDate");
txtfromDate.Focus();
}
else
{
DataTable dt = new DataTable();
dt = Specimen.Get_SpecimenDetailsForInvoice_Bookwise(bookCode2, BookCode, Convert.ToDateTime(from), Convert.ToDateTime(To)).Tables[0];
ReportDocument CR = new ReportDocument();
CR.Load(Server.MapPath("Report/BookWiseReport.rpt"));
cryBookwise.SeparatePages = false;
CR.SetDataSource(dt);
cryBookwise.ReportSource = CR;
}
}
}
}
private IEnumerable <Specimen> GetSpecimens(IEnumerable <int> specimenIds)
{
foreach (int specimenId in specimenIds)
{
Specimen specimen = new Specimen();
specimen.Get(specimenId);
yield return(specimen);
}
}
public void BindEmployee()
{
DDLEmployee.Items.Clear();
//DDLCustomer.DataSource = DCMaster.Get_Customer_PendingDocNo("Customer");
//DDLEmployee.DataSource = Specimen.Get_PedingDocNo_Employee(Convert.ToInt32(strFY));
DDLEmployee.DataSource = Specimen.Get_PedingDocNo_Employee(Convert.ToInt32(strFY));
DDLEmployee.DataBind();
DDLEmployee.Items.Insert(0, new ListItem("- Select Employee -", "0"));
}
//used to update specimen status on deleting collection
private void UpdateSpecimenStatus(int specId, string status)
{
Specimen bizSpec = new Specimen();
bizSpec.Get(specId);
bizSpec[Specimen.SpecimenStatus] = status;
bizSpec.Save();
}
public async Task <ActionResult> DeleteConfirmed(int id)
{
Specimen specimen = await db.GetByIdAsync(id);
db.Remove(specimen);
await db.SaveChangesAsync();
return(RedirectToAction("Index"));
}
public ManGenome cross(GameConstants consts, Random rnd, Specimen other)
#endif
{
#if testGenome
return(new TestGenome(consts, rnd, g, other.g));
#else
return(new ManGenome(consts, rnd, g, other.g));
#endif
}
// hurt all the specimen of the specie by a given amount
public void HurtSpecimens()
{
FreakOut();
foreach (GameObject specimenObject in agents)
{
Specimen specimen = specimenObject.GetComponent <Specimen>();
specimen.TakeDamage(HurtDamage);
}
}
private void addSpecimen(ManGenome g)
#endif
{
Specimen s = new Specimen(g, consts);
resetSpecimen(s);
s.computeFitness();
specimens.Add(s);
}
protected void Page_Load(object sender, EventArgs e)
{
if (!Page.IsPostBack)
{
Cleardata();
Rptrpending.DataSource = Specimen.Get_ApprovedDocNo();
Rptrpending.DataBind();
}
}
public override void Visit(Specimen.Model.SpecimenOrder specimenOrder)
{
if (specimenOrder.AliquotOrderCollection.Exists(this.m_AliquotOrder.AliquotOrderId) == true)
{
while (this.m_AliquotOrder.TestOrderCollection.Count != 0)
{
RemoveTestOrderVisitor removeTestOrderVisitor = new RemoveTestOrderVisitor(m_AliquotOrder.TestOrderCollection[0].TestOrderId);
this.m_AccessionOrder.TakeATrip(removeTestOrderVisitor);
}
specimenOrder.AliquotOrderCollection.Remove(this.m_AliquotOrder);
}
}
public Specimen Execute(Specimen specimen)
{
var toBeChanged =
specimen.Problem.Lines.Select(line => specimen.Random.NextDouble())
.Select(rolled => rolled < _chance ? 1 : 0)
.ToList();
for (var i = 0; i < specimen.Problem.Lines.Count; i++)
{
if (toBeChanged[i] != 1) continue;
var busses = specimen.Distribution.Sum();
var max = specimen.Problem.NumberOfBuses - busses;
var min = -(specimen.Distribution[i] - 1);
if (min < max)
{
specimen.Distribution[i] += specimen.Random.Next(min, max);
}
}
specimen.CalculateSpecimentValue();
return specimen;
}
public static Specimen Mutate(this Specimen spec)
{
if (spec.Genes == null || spec.Genes.Length == 0)
{
throw new ArgumentException("Genes array cannot be empty!");
}
var mutated = new Specimen();
SetGenes(ref mutated, spec.Genes);
for (int i = 0; i < spec.Genes.Length; i++)
{
if (UniteRandom.Sample() <= Specimen.MutationRate)
{
mutated.Genes[i] = GeneRandom.Sample();
}
}
return mutated;
}
private void BuildAliquotOrderLeftSide(Specimen.Model.SpecimenOrder specimenOrder, XElement specimenOrderElement)
{
List<XElement> aliquotOrderElements = (from item in specimenOrderElement.Elements("AliquotOrderCollection")
select item).ToList<XElement>();
foreach (XElement aliquotOrderElement in aliquotOrderElements.Elements("AliquotOrder"))
{
YellowstonePathology.Business.Test.AliquotOrder aliquotOrder = new Test.AliquotOrder();
YellowstonePathology.Business.Persistence.XmlPropertyWriter xmlPropertyWriter = new Persistence.XmlPropertyWriter(aliquotOrderElement, aliquotOrder);
xmlPropertyWriter.Write();
BuildAliquotOrderTestOrder(aliquotOrder, aliquotOrderElement);
BuildAliquotOrderSlideOrderCollection(aliquotOrder, aliquotOrderElement);
specimenOrder.AliquotOrderCollection.Add(aliquotOrder);
}
}
public void SpecimenWorking()
{
//Prepare
var spec = new Specimen()
{
AccessionNumber = "TestAccession",
CollectionEventID = 1,
};
//Execute
var id = _target.InsertSpecimen(spec, TestResources.Credentials);
//Assert
//Nothing to assert
}
public static string GetNextSpecimenOrderId(Specimen.Model.SpecimenOrderCollection specimenOrderCollection, string masterAccessionNo)
{
string result = string.Empty;
int largestId = 0;
foreach (Specimen.Model.SpecimenOrder specimenOrder in specimenOrderCollection)
{
OrderIdParser orderIdParser = new OrderIdParser(specimenOrder.SpecimenOrderId);
int? specimenOrderNo = orderIdParser.SpecimenOrderNo;
if (specimenOrderNo.Value > largestId) largestId = specimenOrderNo.Value;
}
return masterAccessionNo + "." + (largestId + 1).ToString();
}
public AccessionOrderDataSheetDataSpecimenOrder(Specimen.Model.SpecimenOrder specimenOrder, ClientOrder.Model.ClientOrderCollection clientOrderCollection)
{
string specimenNumber = specimenOrder.SpecimenNumber.ToString();
string specimenDescription = specimenOrder.Description;
this.m_Description = specimenNumber + ". " + specimenDescription;
this.m_CollectionTime = string.Empty;
if (specimenOrder.CollectionDate.HasValue == true)
{
YellowstonePathology.Business.Helper.DateTimeJoiner dateTimeJoiner = new Business.Helper.DateTimeJoiner(specimenOrder.CollectionDate.Value, specimenOrder.CollectionTime);
this.m_CollectionTime = dateTimeJoiner.DisplayString;
}
else if (specimenOrder.CollectionTime.HasValue == true)
{
YellowstonePathology.Business.Helper.DateTimeJoiner dateTimeJoiner = new Business.Helper.DateTimeJoiner(specimenOrder.CollectionTime.Value, specimenOrder.CollectionTime);
this.m_CollectionTime = dateTimeJoiner.DisplayString;
}
this.m_ReceivedIn = string.IsNullOrEmpty(specimenOrder.ClientFixation) == false ? specimenOrder.ClientFixation : string.Empty;
this.m_ProcessedIn = string.IsNullOrEmpty(specimenOrder.LabFixation) == false ? specimenOrder.LabFixation : string.Empty;
this.m_AccessionTime = specimenOrder.AccessionTime.HasValue ? specimenOrder.AccessionTime.Value.ToShortDateString() + " " + specimenOrder.AccessionTime.Value.ToShortTimeString() : string.Empty;
this.m_Verified = specimenOrder.Verified.ToString();
this.m_VerifiedById = specimenOrder.VerifiedById.ToString();
this.m_VerifiedDate = specimenOrder.VerifiedDate.HasValue ? specimenOrder.VerifiedDate.Value.ToShortDateString() + " " + specimenOrder.VerifiedDate.Value.ToShortTimeString() : string.Empty;
List<ClientOrder.Model.ClientOrderDetail> clientOrderDetails = (from co in clientOrderCollection
from cod in co.ClientOrderDetailCollection
where cod.ContainerId == specimenOrder.ContainerId
select cod).ToList<ClientOrder.Model.ClientOrderDetail>();
if (clientOrderDetails.Count > 0)
{
ClientOrder.Model.ClientOrderDetail clientOrderDetail = clientOrderDetails[0];
string clientSpecimenNumber = clientOrderDetail.SpecimenNumber.ToString();
string clientDescription = clientOrderDetail.Description;
this.m_ClientDescription = clientSpecimenNumber + ". " + clientDescription;
this.m_AccessionedAsDescription = clientOrderDetail.DescriptionToAccession;
this.m_AccessionedAsNumberedDescription = clientSpecimenNumber + ". " + this.m_AccessionedAsDescription;
this.m_SpecialInstructions = string.IsNullOrEmpty(clientOrderDetail.SpecialInstructions) == false ? clientOrderDetail.SpecialInstructions : string.Empty;
//this.m_SpecialInstructions = clientOrderDetail.OrderType;
this.m_OrderType = string.IsNullOrEmpty(clientOrderDetail.OrderType) == false ? clientOrderDetail.OrderType : string.Empty;
this.m_CallbackNumber = string.IsNullOrEmpty(clientOrderDetail.CallbackNumber) == false ? clientOrderDetail.CallbackNumber : string.Empty;
if (clientOrderDetail.CollectionDate.HasValue)
{
this.m_CollectionDate = clientOrderDetail.CollectionDate.HasValue ? clientOrderDetail.CollectionDate.Value.ToShortDateString() + " " + clientOrderDetail.CollectionDate.Value.ToShortTimeString() : string.Empty;
}
this.m_SpecimenNumberMatchStatus = string.IsNullOrEmpty(clientOrderDetail.SpecimenNumberMatchStatus) == false ? clientOrderDetail.SpecimenNumberMatchStatus : string.Empty;
this.m_SpecimenDescriptionMatchStatus = string.IsNullOrEmpty(clientOrderDetail.SpecimenDescriptionMatchStatus) == false ? clientOrderDetail.SpecimenDescriptionMatchStatus : string.Empty;
this.m_OrderedBy = clientOrderDetail.OrderedBy;
this.m_OrderTime = clientOrderDetail.OrderTime.HasValue ? clientOrderDetail.OrderTime.Value.ToShortDateString() + " " + clientOrderDetail.OrderTime.Value.ToShortTimeString() : string.Empty;
this.m_Accessioned = clientOrderDetail.Accessioned.ToString();
}
else
{
this.m_Description = "None";
this.m_AccessionedAsDescription = string.Empty;
this.m_AccessionedAsNumberedDescription = string.Empty;
this.m_SpecialInstructions = string.Empty;
this.m_OrderType = string.Empty;
this.m_CallbackNumber = string.Empty;
this.m_CollectionDate = string.Empty;
this.m_SpecimenNumberMatchStatus = string.Empty;
this.m_SpecimenDescriptionMatchStatus = string.Empty;
this.m_OrderedBy = string.Empty;
this.m_OrderTime = string.Empty;
this.m_Accessioned = string.Empty;
}
}
public static bool IsSimilar(this Specimen spec1, Specimen spec2)
{
var diff = 0.0;
for (int i = 0; i < spec1.Length; i++)
{
diff += Math.Abs(spec1.Genes[i] - spec2.Genes[i]);
}
return diff <= SimilarityThreshold;
}
public static void GenerateGenes(ref Specimen spec)
{
if (spec.Length <= 0)
{
throw new ArgumentException("Specimen Genes Length must be greater that zero!");
}
double min = Specimen.MinGeneValue;
double max = Specimen.MaxGeneValue;
var genes = new double[spec.Length];
for (int i = 0; i < spec.Length; i++)
{
genes[i] = GeneRandom.Sample();
}
spec.Genes = genes;
}
private void BuildAliquotOrderLeftSide(Specimen.Model.SpecimenOrder specimenOrder, XElement specimenOrderElement)
{
List<XElement> aliquotOrderElements = (from item in specimenOrderElement.Elements("AliquotOrderCollection")
select item).ToList<XElement>();
specimenOrder.AliquotOrderCollection.RemoveDeleted(aliquotOrderElements.Elements("AliquotOrder"));
foreach (XElement aliquotOrderElement in aliquotOrderElements.Elements("AliquotOrder"))
{
string aliquotOrderId = aliquotOrderElement.Element("AliquotOrderId").Value;
YellowstonePathology.Business.Test.AliquotOrder aliquotOrder = null;
if (specimenOrder.AliquotOrderCollection.Exists(aliquotOrderId) == true)
{
aliquotOrder = specimenOrder.AliquotOrderCollection.Get(aliquotOrderId);
}
else
{
aliquotOrder = new Test.AliquotOrder();
specimenOrder.AliquotOrderCollection.Add(aliquotOrder);
}
YellowstonePathology.Business.Persistence.XmlPropertyWriter xmlPropertyWriter = new Persistence.XmlPropertyWriter(aliquotOrderElement, aliquotOrder);
xmlPropertyWriter.Write();
BuildAliquotOrderTestOrder(aliquotOrder, aliquotOrderElement);
BuildAliquotOrderSlideOrderCollection(aliquotOrder, aliquotOrderElement);
}
}
public static void SetGenes(ref Specimen spec, double[] genes)
{
if (genes == null || genes.Length == 0)
{
throw new ArgumentException("Genes array cannot be empty!");
}
spec.Genes = new double[genes.Length];
genes.CopyTo(spec.Genes, 0);
spec.Length = genes.Length;
}
