public SpectrumViewVisualizeEventArgs (NHibernate.ISession session, SpectrumTableForm.PeptideSpectrumMatchRow row)
{
PeptideSpectrumMatchId = row.PeptideSpectrumMatchId;
Spectrum = row.Spectrum;
SpectrumSource = row.Source;
Analysis = row.Analysis;
Charge = row.Charge;
lock (session)
{
var psm = session.Load<PeptideSpectrumMatch>(PeptideSpectrumMatchId);
ModifiedSequence = psm.ToModifiedString(5);
session.Evict(psm);
}
}
public static void AddSubsetPeakData (NHibernate.ISession session)
{
session.Transaction.Begin();
session.Clear();
foreach (SpectrumSource source in session.Query<SpectrumSource>())
{
var subsetPeakData = new msdata.MSData();
subsetPeakData.id = subsetPeakData.run.id = source.Name;
var spectrumList = new msdata.SpectrumListSimple();
subsetPeakData.run.spectrumList = spectrumList;
foreach (Spectrum spectrum in source.Spectra.OrderBy(o => o.Index))
{
var spectrumData = new msdata.Spectrum();
spectrumData.id = spectrum.NativeID;
spectrumData.index = spectrum.Index;
spectrumData.setMZIntensityArrays(new List<double>() { 100, 200, 300, 400, 500 },
new List<double>() { 10, 20, 30, 40, 50 });
spectrumList.spectra.Add(spectrumData);
}
session.Evict(source);
var newSource = new SpectrumSource(subsetPeakData)
{
Id = source.Id,
Group = source.Group,
Name = source.Name,
URL = source.URL
};
session.Update(newSource);
}
session.Transaction.Commit();
}
/// <summary>
/// Initialize Collection or Proxy
/// ���ⲿInitialize��Ĭ��LockMode=Write�����ΪNone������д���ݿ⡣Lock��Ҫ��Evict
/// </summary>
/// <param name="proxy"></param>
/// <param name="owner"></param>
/// <param name="session"></param>
internal static void Initialize(object proxy, object owner, NHibernate.ISession session)
{
if (null == proxy)
return;
if (!NHibernateUtil.IsInitialized(proxy))
{
if (proxy is INHibernateProxy)
{
session.Lock(proxy, NHibernate.LockMode.None);
NHibernateUtil.Initialize(proxy);
session.Evict(proxy);
}
else if (proxy is IPersistentCollection)
{
bool b = session.Contains(owner);
if (!b)
{
session.Lock(owner, NHibernate.LockMode.None);
}
NHibernateUtil.Initialize(proxy);
if (!b)
{
session.Evict(owner);
}
}
//if (proxy is INHibernateProxy || proxy is IPersistentCollection)
//{
// if (proxy is INHibernateProxy) session.Lock(proxy, NHibernate.LockMode.None);
// else if (!session.Contains(owner)) session.Lock(owner, NHibernate.LockMode.None);
// NHibernateUtil.Initialize(proxy);
//}
}
}
