Exemplo n.º 1
0
        public unsafe void BuildDetector(INCCInitialDataDetectorFile iddf, int num)
        {
            INCCDB DB = NC.App.DB;

            detector_rec d = iddf.Detector[0];
            sr_parms_rec sr = iddf.SRParms[0];
            bkg_parms_rec bkh = iddf.BKGParms[0];
            norm_parms_rec norm = iddf.NormParms[0];
            tm_bkg_parms_rec tmbkg = iddf.TMBKGParms[0];
            add_a_source_setup_rec aass = iddf.AASParms[0];

            InstrType srtype = (InstrType)sr.sr_type;

            bool overwrite = NC.App.AppContext.OverwriteImportedDefs;

            mlogger.TraceEvent(LogLevels.Verbose, 34100, "Building '{0}' detector '{1}' from {2} {3}",
                                srtype.ToString(),
                                TransferUtils.str(d.detector_id, INCC.MAX_DETECTOR_ID_LENGTH),
                                num, iddf.Path);

            // if the detector is not known internally, then
            //        add the detector to the list of detectors in memory, and
            //        associate a new set of SR, Bkg and Norm and AB params with the new detector
            // todo: What are the HV Params from INCC5, and once that is known, can they be transferred to the INCC6 HV Param and results tables
            Detector det = new Detector();
            if (srtype.IsListMode())
                det.Id.FullConnInfo = new LMConnectionInfo();

            try
            {
                // this transfer should be a method in this class, it will be used elsewhere too
                det.Id.DetectorId = TransferUtils.str(d.detector_id, INCC.MAX_DETECTOR_ID_LENGTH);
                det.Id.SRType = srtype;
                det.Id.Type = TransferUtils.str(d.detector_type, INCC.DETECTOR_TYPE_LENGTH);
                det.Id.ElectronicsId = TransferUtils.str(d.electronics_id, INCC.ELECTRONICS_ID_LENGTH);
                det.Id.ConnInfo = sr.sr_port_number.ToString();
                det.Id.source = ConstructedSource.INCCTransferCopy;
                det.MultiplicityParams.FA = srtype.DefaultFAFor();
                det.MultiplicityParams.gateWidthTics = (ulong)(sr.gate_length * 10.0);  // shift down to tics from microseconds
                det.SRParams.deadTimeCoefficientAinMicroSecs = sr.coeff_a_deadtime;
                det.SRParams.deadTimeCoefficientBinPicoSecs = sr.coeff_b_deadtime;
                det.SRParams.deadTimeCoefficientCinNanoSecs = sr.coeff_c_deadtime;
                det.SRParams.deadTimeCoefficientMultiplicityinNanoSecs = sr.multiplicity_deadtime;
                det.SRParams.dieAwayTime = sr.die_away_time * 10.0;  // shift down to tics from microseconds
                det.SRParams.doublesGateFraction = sr.doubles_gate_fraction;
                det.SRParams.efficiency = sr.efficiency;
                det.SRParams.gateLength = (ulong)(sr.gate_length * 10.0);  // shift down to tics from microseconds
                //det.SRParams.gateLength2 = sr.gate_length2;
                det.SRParams.highVoltage = sr.high_voltage;
                det.SRParams.predelay = (ulong)(sr.predelay * 10.0);  // shift down to tics from microseconds
                det.SRParams.triplesGateFraction = sr.triples_gate_fraction;
                //    = sr.sr_type , sr.sr_port_number, sr.sr_detector_id  these are in the Id now, not the SRparams, but they travel together.

                if (NC.App.AppContext.OverwriteImportedDefs)
                    DB.Detectors.Replace(det);
                else
                    DB.Detectors.AddOnlyIfNotThere(det);
                DetectorIndex = DB.Detectors.Count - 1;

                BackgroundParameters bkg = new BackgroundParameters();
                bkg.DeadtimeCorrectedRates.Singles.v = bkh.curr_passive_bkg_singles_rate;
                bkg.DeadtimeCorrectedRates.Doubles.v = bkh.curr_passive_bkg_doubles_rate;
                bkg.DeadtimeCorrectedRates.Triples.v = bkh.curr_passive_bkg_triples_rate;
                bkg.DeadtimeCorrectedRates.Singles.err = bkh.curr_passive_bkg_singles_err;
                bkg.DeadtimeCorrectedRates.Doubles.err = bkh.curr_passive_bkg_doubles_err;
                bkg.DeadtimeCorrectedRates.Triples.err = bkh.curr_passive_bkg_triples_err;
                bkg.Scaler1.v = bkh.curr_passive_bkg_scaler1_rate;
                bkg.Scaler2.v = bkh.curr_passive_bkg_scaler2_rate;
                bkg.INCCActive.Singles.v = bkh.curr_active_bkg_singles_rate;
                bkg.INCCActive.Singles.err = bkh.curr_active_bkg_singles_err;
                bkg.INCCActive.Scaler1Rate = bkh.curr_active_bkg_scaler1_rate;
                bkg.INCCActive.Scaler2Rate = bkh.curr_active_bkg_scaler2_rate;
                bkg.TMBkgParams.Singles.v = tmbkg.tm_singles_bkg;
                bkg.TMBkgParams.Ones.v = tmbkg.tm_ones_bkg;
                bkg.TMBkgParams.Twos.v = tmbkg.tm_twos_bkg;
                bkg.TMBkgParams.Zeros.v = tmbkg.tm_zeros_bkg;
                bkg.TMBkgParams.Singles.err = tmbkg.tm_singles_bkg_err;
                bkg.TMBkgParams.Ones.err = tmbkg.tm_ones_bkg_err;
                bkg.TMBkgParams.Twos.err = tmbkg.tm_twos_bkg_err;
                bkg.TMBkgParams.Zeros.err = tmbkg.tm_zeros_bkg_err;
                bkg.TMBkgParams.ComputeTMBkg = (tmbkg.tm_bkg == 0 ? false : true);

                if (DB.BackgroundParameters.Get(det.Id.DetectorName) == null)
                {
                    DB.BackgroundParameters.GetMap().Add(det, bkg); // saved to DB at below
                }
                else if (overwrite)
                {
                    bkg.modified = true;
                    NC.App.DB.BackgroundParameters.GetMap().Remove(det);
                    NC.App.DB.BackgroundParameters.GetMap().Add(det, bkg);
                    NC.App.DB.BackgroundParameters.Set(det, bkg);
                }

                // save the params listed here using the detector as the key
                NormParameters normp = new NormParameters();
                normp.acceptanceLimitPercent = norm.acceptance_limit_percent;
                normp.acceptanceLimitStdDev = norm.acceptance_limit_std_dev;
                normp.amliRefSinglesRate = norm.amli_ref_singles_rate;
                normp.biasMode = OldToNewBiasTestId(norm.bias_mode);
                normp.biasPrecisionLimit = norm.bias_precision_limit;
                normp.biasTestAddasrcPosition = norm.bias_test_addasrc_position;
                normp.biasTestUseAddasrc = (norm.bias_test_use_addasrc == 0 ? false : true);
                normp.cf252RefDoublesRate.v = norm.cf252_ref_doubles_rate;
                normp.currNormalizationConstant.v = norm.curr_normalization_constant;
                normp.currNormalizationConstant.err = norm.curr_normalization_constant_err;
                normp.initSrcPrecisionLimit = norm.init_src_precision_limit;
                normp.measRate.v = norm.meas_rate;
                normp.measRate.err = norm.meas_rate_err;
                normp.refDate = INCC.DateFrom(TransferUtils.str(norm.ref_date, INCC.DATE_TIME_LENGTH));
                normp.sourceId = TransferUtils.str(norm.source_id, INCC.SOURCE_ID_LENGTH);
                normp.yieldRelativeToMrc95 = norm.yield_relative_to_mrc_95;

                if (DB.NormParameters.Get(det.Id.DetectorName) == null)
                {
                    DB.NormParameters.GetMap().Add(det, normp); // saved to DB at end
                }
                else if (overwrite)
                {
                    normp.modified = true;
                    DB.NormParameters.GetMap().Remove(det);
                    DB.NormParameters.GetMap().Add(det, normp); // the in-memory map
                    DB.NormParameters.Set(det, normp);  // the DB table
                }
                AddASourceSetup aassp = new AddASourceSetup();
                aassp.type = OldToNewAASId(aass.ad_type);
                aassp.port_number = aass.ad_port_number;
                aassp.forward_over_travel = aass.ad_forward_over_travel;
                aassp.reverse_over_travel = aass.ad_reverse_over_travel;
                aassp.number_positions = aass.ad_number_positions;
                aassp.dist_to_move = TransferUtils.Copy(aass.ad_dist_to_move, INCC.MAX_ADDASRC_POSITIONS);
                aassp.cm_steps_per_inch = aass.cm_steps_per_inch;
                aassp.cm_forward_mask = aass.cm_forward_mask;
                aassp.cm_reverse_mask = aass.cm_reverse_mask;
                aassp.cm_axis_number = aass.cm_axis_number;
                aassp.cm_over_travel_state = aass.cm_over_travel_state;
                aassp.cm_step_ratio = aass.cm_step_ratio;
                aassp.cm_slow_inches = aass.cm_slow_inches;
                aassp.plc_steps_per_inch = aass.plc_steps_per_inch;
                aassp.scale_conversion_factor = aass.scale_conversion_factor;
                aassp.cm_rotation = (aass.cm_rotation == 0 ? false : true);

                if (!DB.AASSParameters.GetMap().ContainsKey(det))
                {
                    DB.AASSParameters.GetMap().Add(det, aassp);
                }
                else if (overwrite)
                {
                    aassp.modified = true;
                    DB.AASSParameters.GetMap().Remove(det);
                    DB.AASSParameters.GetMap().Add(det, aassp); // todo: in-memory and db
                }
                if (!DB.UnattendedParameters.GetMap().ContainsKey(det))
                {
                    DB.UnattendedParameters.GetMap().Add(det, new UnattendedParameters());
                }
                else if (overwrite)
                {
                    DB.UnattendedParameters.GetMap().Remove(det);
                    DB.UnattendedParameters.GetMap().Add(det, new UnattendedParameters());
                }

                // the alpha beta arrays must be sized here, for first use by the calc_alpha_beta code in the cycle conditioning code
                Multiplicity mkey = new Multiplicity(srtype.DefaultFAFor());
                mkey.SR = new ShiftRegisterParameters(det.SRParams);
                MultiplicityCountingRes mcr = new MultiplicityCountingRes(srtype.DefaultFAFor(), 0);
                ABKey abkey = new ABKey(mkey, 512); // NEXT: maxbins is arbitrary
                LMRawAnalysis.SDTMultiplicityCalculator.SetAlphaBeta(abkey, det.AB);
                mcr.AB.TransferIntermediates(det.AB);
            }
            catch (Exception e)
            {
                mlogger.TraceEvent(LogLevels.Warning, 34064, "Detector transfer processing error {0} {1} ({2})", det.Id.DetectorName, e.Message, System.IO.Path.GetFileName(iddf.Path));
            }
        }
Exemplo n.º 2
0
        void TestDataAssay()
        {
            List<string> exts = new List<string>() { ".dat", ".cnn" };
            FileList<TestDataFile> hdlr = new FileList<TestDataFile>();
            hdlr.Init(exts, ctrllog);
            FileList<TestDataFile> files = null;

            // initialize operation timer here
            NC.App.Opstate.ResetTimer(filegather, files, 170, (int)NC.App.AppContext.StatusTimerMilliseconds);
            FireEvent(EventType.ActionPrep, this);
            NC.App.Opstate.StampOperationStartTime();

            if (NC.App.AppContext.FileInputList == null)
                files = (FileList<TestDataFile>)hdlr.BuildFileList(NC.App.AppContext.FileInput, NC.App.AppContext.Recurse, true);
            else
                files = (FileList<TestDataFile>)hdlr.BuildFileList(NC.App.AppContext.FileInputList);
            if (files == null || files.Count < 1)
            {
                NC.App.Opstate.StopTimer();
                NC.App.Opstate.StampOperationStopTime();
                FireEvent(EventType.ActionStop, this);
                ctrllog.TraceEvent(LogLevels.Warning, 33085, "No usable Test data/Disk .dat or .cnn files found");
                return;
            }

            AcquireParameters orig_acq = new AcquireParameters(NC.App.Opstate.Measurement.AcquireState);
            Detector curdet = NC.App.Opstate.Measurement.Detector;
            AssaySelector.MeasurementOption mo = NC.App.Opstate.Measurement.MeasOption;

            if (curdet.AB.Unset)
            {
                ABKey abkey = new ABKey(curdet.MultiplicityParams, 512);  // NEXT: maxbins is arbitrary, just the first of many for VSR
                LMRawAnalysis.SDTMultiplicityCalculator.SetAlphaBeta(abkey, curdet.AB);
            }

            // Each .dat file is a separate measurement
            foreach (TestDataFile td in files)
            {
                Measurement meas = null;
                ResetMeasurement();

                try
                {
                    if (!td.OpenForReading())
                        continue;
                    if (NC.App.Opstate.IsQuitRequested)
                        break;
                    uint run_seconds;

                    ushort number_good_runs = 0;
                    ushort total_number_runs = 0;
                    double run_count_time = 0;
                    double total_good_count_time = 0;

                    if (mo != AssaySelector.MeasurementOption.holdup)
                    {
                        /* number of good runs */
                        string l = td.reader.ReadLine();
                        ushort.TryParse(l, out number_good_runs);
                        if (number_good_runs == 0)
                        {
                            ctrllog.TraceEvent(LogLevels.Error, 440, "This measurement has no good cycles.");
                            continue;
                        }
                        /* run count time */
                        l = td.reader.ReadLine();
                        double.TryParse(l, out run_count_time);
                        if (run_count_time <= 0.0)
                        {
                            ctrllog.TraceEvent(LogLevels.Error, 441, "Count time is <= 0.");
                            continue;
                        }
                    }

                    // update acq and then meas here
                    AcquireParameters newacq = ConfigureAcquireState(curdet, orig_acq, DateTimeOffset.Now, number_good_runs, td.Filename);
                    IntegrationHelpers.BuildMeasurement(newacq, curdet, mo);
                    meas = NC.App.Opstate.Measurement;
                    meas.MeasDate = newacq.MeasDateTime;
                    meas.Persist();  // preserve the basic results record

                    /* convert to total count time */
                    total_number_runs = number_good_runs;
                    total_good_count_time = number_good_runs *
                        run_count_time;
                    meas.RequestedRepetitions = total_number_runs;

                    // update the acq status and do the persist

                    /* read in run data */
                    for (int i = 0; i < number_good_runs; i++)
                    {
                        /* run date and time (IAEA format) */
                        run_seconds = (uint)(i * (ushort)run_count_time); // from start time
                        AddTestDataCycle(i, run_seconds, run_count_time, meas, td);
                        if (i % 8 == 0)
                            FireEvent(EventType.ActionInProgress, this);
                    }
                    FireEvent(EventType.ActionInProgress, this);

                    if (meas.MeasOption == AssaySelector.MeasurementOption.verification &&
                        meas.INCCAnalysisState.Methods.Has(AnalysisMethod.AddASource) &&
                        meas.AcquireState.well_config == WellConfiguration.Passive)
                    {
                        AddASourceSetup aass = IntegrationHelpers.GetCurrentAASSParams(meas.Detector);
                        for (int n = 1; n <= aass.number_positions; n++)
                        {
                            /* number of good runs */
                            string l = td.reader.ReadLine();
                            if (td.reader.EndOfStream)
                            {
                                ctrllog.TraceEvent(LogLevels.Error, 440, "No add-a-source data found in disk file. AAS p" + n.ToString());
                            }
                            ushort.TryParse(l, out number_good_runs);
                            if (number_good_runs == 0)
                            {
                                ctrllog.TraceEvent(LogLevels.Error, 440, "This measurement has no good cycles. AAS p" + n.ToString());
                                continue;
                            }
                            /* run count time */
                            l = td.reader.ReadLine();
                            double.TryParse(l, out run_count_time);
                            if (run_count_time <= 0.0)
                            {
                                ctrllog.TraceEvent(LogLevels.Error, 441, "Count time is <= 0. AAS p" + n.ToString());
                                continue;
                            }
                            /* read in run data */
                            for (int i = 0; i < number_good_runs; i++)
                            {
                                /* run date and time (IAEA format) */
                                run_seconds = (uint)((n + 1) * (i + 1) * (ushort)run_count_time); // from start time
                                AddTestDataCycle(i, run_seconds, run_count_time, meas, td, " AAS p" + n.ToString(), n);
                                if (i % 8 == 0)
                                    FireEvent(EventType.ActionInProgress, this);
                            }
                            FireEvent(EventType.ActionInProgress, this);
                        }
                    }
                }
                catch (Exception e)
                {
                    NC.App.Opstate.SOH = OperatingState.Trouble;
                    ctrllog.TraceException(e, true);
                    ctrllog.TraceEvent(LogLevels.Error, 437, "Test data file processing stopped with error: '" + e.Message + "'");
                }
                finally
                {
                    td.CloseReader();
                    NC.App.Loggers.Flush();
                }
                FireEvent(EventType.ActionInProgress, this);
                ComputeFromINCC5SRData(meas);
                FireEvent(EventType.ActionInProgress, this);
            }

            NC.App.Opstate.ResetTokens();
            NC.App.Opstate.SOH = OperatingState.Stopping;
            NC.App.Opstate.StampOperationStopTime();
            FireEvent(EventType.ActionFinished, this);
        }
Exemplo n.º 3
0
        // cf index only for AAS positional cycles
        unsafe ulong AddToCycleList(run_rec run, Detector det, int cfindex = -1)
        {
            Cycle cycle = new Cycle(mlogger);
            ulong MaxBins = 0;
            try
            {
                cycle.UpdateDataSourceId(ConstructedSource.INCCTransferCopy, // becomes transfer if reanalysis occurs
                                            det.Id.SRType,
                                            INCC.DateTimeFrom(TransferUtils.str(run.run_date, INCC.DATE_TIME_LENGTH), TransferUtils.str(run.run_time, INCC.DATE_TIME_LENGTH)), det.Id.FileName);
                meas.Add(cycle, cfindex);

                // mcr is created and stored in the cycle's CountingAnalysisResults
                MultiplicityCountingRes mcr = RunToCycle(run, cycle, det.MultiplicityParams);
                // AB is calculated at runtime when conditioning a cycle AFAICT, so its gotta be worked here at least once
                if (det.AB.Unset)
                {
                    ABKey abkey = new ABKey(det.MultiplicityParams, mcr);
                    LMRawAnalysis.SDTMultiplicityCalculator.SetAlphaBeta(abkey, det.AB);
                }
                mcr.AB.TransferIntermediates(det.AB);  // copy alpha beta onto the cycle's results
                MaxBins = mcr.MaxBins;
            }
            catch (Exception e)
            {
                mlogger.TraceEvent(LogLevels.Warning, 33085, "Cycle processing error {0} {1}", run.run_number, e.Message);
            }
            return MaxBins;
        }
Exemplo n.º 4
0
        /// <summary>
        /// Process one or more .NCC Review measurement data files, with related .NOP/.COP files.
        /// Presence of NOP/COP files is optional
        /// See Import Operator Declarations from Operator Review and Measurements from Radiation Review p. 24,
        /// See Operator Declaration File Format p. 87, 
        /// See Operator Declaration File Format for Curium Ratio Measurements p. 88, 
        /// See Radiation Review Measurement Data File Format p. 93, INCC Software Users Manual, March 29, 2009
        /// </summary>
        void INCCReviewFileProcessing()
        {
            FireEvent(EventType.ActionPrep, this);
            NC.App.Opstate.StampOperationStartTime();
            // This code would be the same for an interactive version of this operation
            //  > Start here
            // first find and process and .NOP files
            List<string> exts = new List<string>() { ".nop", ".cop" };
            FileList<CSVFile> hdlr = new FileList<CSVFile>();
            hdlr.Init(exts, ctrllog);
            FileList<CSVFile> files = null;
            OPFiles opfiles = new OPFiles();

            // The INCC5 semantics
            if (NC.App.AppContext.FileInputList == null)
                files = (FileList<CSVFile>)hdlr.BuildFileList(NC.App.AppContext.FileInput, NC.App.AppContext.Recurse, true);
            else
                files = (FileList<CSVFile>)hdlr.BuildFileList(NC.App.AppContext.FileInputList);
            if (files != null && files.Count > 0)
            {
                // construct lists of isotopics and items from the NOP and COP files
                opfiles.Process(files);
                ctrllog.TraceEvent(LogLevels.Verbose, 33085, "NOP items " + opfiles.Results.ItemIds.Count);
            }
            else
                ctrllog.TraceEvent(LogLevels.Warning, 33085, "No operator declarations available, continuing with default values");

            // process the NCC files only
            INCCFileOrFolderInfo foo = new INCCFileOrFolderInfo(ctrllog, "*.NCC");
            if (NC.App.AppContext.FileInputList == null)
                foo.SetPath(NC.App.AppContext.FileInput);
            else
                foo.SetFileList(NC.App.AppContext.FileInputList);
            foo.eh += new TransferEventHandler((s, e) => { FireEvent(EventType.ActionInProgress, e); });
            List<INCCTransferBase> res = foo.Restore();
            // use RemoveAll to cull those NCC files that reference a non-existent detector
            DetectorList dl = NC.App.DB.Detectors;
            foreach (INCCReviewFile rf in res)
            {
                List<Detector> tdk = dl.FindAll(d => 0 == string.Compare(d.Id.DetectorName, rf.detector, true));
                if (tdk.Count < 1)
                {
                    rf.skip = true;
                    ctrllog.TraceEvent(LogLevels.Warning, 33085, "No detector " + rf.detector + " defined, cannot complete processing NCC review file " + System.IO.Path.GetFileName(rf.Path));
                }
            }
            res.RemoveAll(rf => (rf as INCCReviewFile).skip);
            res.Sort((rf1, rf2) => // sort chronologically
            {
                return DateTime.Compare((rf1 as INCCReviewFile).dt, (rf2 as INCCReviewFile).dt);
            });
            /// end here > The sorted, filtered and processed list here would be returned to the UI for display and interactive selection
            if (res == null || res.Count < 1)
            {
                NC.App.Opstate.StopTimer();
                NC.App.Opstate.StampOperationStopTime();
                FireEvent(EventType.ActionStop, this);
                ctrllog.TraceEvent(LogLevels.Warning, 33085, "No usable NCC review files found in " + System.IO.Path.GetFullPath(foo.GetPath()));
                return;
            }

            AcquireParameters orig_acq = new AcquireParameters(NC.App.Opstate.Measurement.AcquireState);

            // Each NCC file is a separate measurement
            foreach (INCCReviewFile irf in res)
            {
                ResetMeasurement();
                if (NC.App.Opstate.IsQuitRequested)
                    break;
                // Find the detector named in the NCC file (existence shown in earlier processing above)
                Detector curdet = NC.App.DB.Detectors.Find(d => string.Compare(d.Id.DetectorName, irf.detector, true) == 0);

                if (curdet.AB.Unset)
                {
                    ABKey abkey = new ABKey(curdet.MultiplicityParams, 512);  // NEXT: maxbins is arbitrary, just the first of many for VSR
                    LMRawAnalysis.SDTMultiplicityCalculator.SetAlphaBeta(abkey, curdet.AB);
                }

                // set up acquire state based on the NCC file content
                AcquireParameters newacq = ConfigureAcquireState(curdet, orig_acq, irf);

                AssaySelector.MeasurementOption mo = NCCMeasOption(irf);
                // make a temp MeasId
                MeasId thisone = new MeasId(mo, newacq.MeasDateTime);
                // get the list of measurement Ids for this detector
                List<MeasId> list = NC.App.DB.MeasurementIds(curdet.Id.DetectorName, mo.PrintName());
                MeasId already = list.Find(mid => mid.Equals(thisone));
                if (already != null)
                {
                    // URGENT: do the replacement as it says
                    ctrllog.TraceEvent(LogLevels.Warning, 33085, "Replacing the matching {0} measurement, timestamp {1} (in a future release)", already.MeasOption.PrintName(), already.MeasDateTime.ToString());
                }

                IntegrationHelpers.BuildMeasurement(newacq, curdet, mo);
                Measurement meas = NC.App.Opstate.Measurement;
                meas.MeasDate = newacq.MeasDateTime; // use the date and time from the NCC file content

                meas.Persist();  // preserve the basic results record
                if (AssaySelector.ForMass(meas.MeasOption) && !meas.INCCAnalysisState.Methods.AnySelected())
                    ctrllog.TraceEvent(LogLevels.Warning, 437, "No mass methods for " + meas.INCCAnalysisState.Methods.selector.ToString());

                try
                {

                    ushort total_number_runs = 0;
                    double run_count_time = 0;
                    double total_good_count_time = 0;

                    if (irf.num_runs == 0)
                    {
                        ctrllog.TraceEvent(LogLevels.Error, 440, "This measurement has no good cycles.");
                        continue;
                    }
                    if (meas.MeasOption == AssaySelector.MeasurementOption.holdup)
                        continue;

                    /* convert to total count time */
                    total_number_runs = irf.num_runs;
                    total_good_count_time = irf.num_runs *
                        run_count_time;
                    meas.RequestedRepetitions = total_number_runs;

                    // convert runs to cycles
                    for (int i = 0; i < irf.num_runs; i++)
                    {
                        /* run date and time (IAEA format) */
                        AddReviewFileCycle(i, irf.runs[i], irf.times[i], meas, irf.Path);
                        if (i % 8 == 0)
                            FireEvent(EventType.ActionInProgress, this);
                    }
                    FireEvent(EventType.ActionInProgress, this);

                    // NEXT: handle true AAS cycles as in INCC5
                    if (meas.MeasOption == AssaySelector.MeasurementOption.verification &&
                        meas.INCCAnalysisState.Methods.Has(AnalysisMethod.AddASource) &&
                        meas.AcquireState.well_config == WellConfiguration.Passive)
                    {
                        ctrllog.TraceEvent(LogLevels.Error, 440, "No add-a-source data processed because the implementation is incomplete. AAS");
                        //AddASourceSetup aass = IntegrationHelpers.GetCurrentAASSParams(meas.Detector);
                        //for (int n = 1; n <= aass.number_positions; n++)
                        //{
                        //    /* number of good runs */
                        //    string l = td.reader.ReadLine();
                        //    if (td.reader.EndOfStream)
                        //    {
                        //        ctrllog.TraceEvent(LogLevels.Error, 440, "No add-a-source data found in disk file. " + "AAS p" + n.ToString());

                        //    }
                        //}
                    }
                }
                catch (Exception e)
                {
                    NC.App.Opstate.SOH = OperatingState.Trouble;
                    ctrllog.TraceException(e, true);
                    ctrllog.TraceEvent(LogLevels.Error, 437, "NCC file processing stopped with error: '" + e.Message + "'");
                }
                finally
                {
                    NC.App.Loggers.Flush();
                }
                FireEvent(EventType.ActionInProgress, this);
                ComputeFromINCC5SRData(meas);
                FireEvent(EventType.ActionInProgress, this);
            }

            NC.App.Opstate.ResetTokens();
            NC.App.Opstate.SOH = OperatingState.Stopping;
            NC.App.Opstate.StampOperationStopTime();
            FireEvent(EventType.ActionFinished, this);
        }
Exemplo n.º 5
0
        // Acquire from Database, Manual data entry and Reanalysis work the same from this point
        void DBDataAssay()
        {
            NC.App.Opstate.ResetTimer(filegather, null, 170, (int)NC.App.AppContext.StatusTimerMilliseconds);
            FireEvent(EventType.ActionPrep, this);
            NC.App.Opstate.StampOperationStartTime();

            Measurement meas = NC.App.Opstate.Measurement;
            if (meas.AcquireState.run_count_time <= 0.0)
            {
                ctrllog.TraceEvent(LogLevels.Error, 441, "Count time is <= 0.");
            }
            else
            if (meas.Cycles.GetUseableCycleCount() < 1)
            {
                ctrllog.TraceEvent(LogLevels.Error, 440, "This measurement has no good cycles.");
            }
            else
            {
                if (meas.Detector.AB.Unset)
                {
                    ABKey abkey = new ABKey(meas.Detector.MultiplicityParams, 512); // NEXT: maxbins is arbitrary, just the first of many for VSR
                    LMRawAnalysis.SDTMultiplicityCalculator.SetAlphaBeta(abkey, meas.Detector.AB);
                }

                meas.Persist();  // preserve the basic results record
                FireEvent(EventType.ActionInProgress, this);
                meas.Cycles.ResetStatus(meas.Detector.MultiplicityParams);  // APluralityOfMultiplicityAnalyzers: set to None, CycleConditioning sets each cycle anew
                ComputeFromINCC5SRData(meas);
                FireEvent(EventType.ActionInProgress, this);
            }

            NC.App.Opstate.ResetTokens();
            NC.App.Opstate.SOH = OperatingState.Stopping;
            NC.App.Opstate.StampOperationStopTime();
            FireEvent(EventType.ActionFinished, this);
        }
Exemplo n.º 6
0
 // for report recalculation
 public static void ReportRecalc(this Measurement m)
 {
     NC.App.Opstate.Measurement = m;
     CycleList cl;
     if (m.Detector.ListMode)
     {
         cl = NC.App.DB.GetCycles(m.Detector, m.MeasurementId, m.AcquireState.data_src, m.AnalysisParams);  // APluralityOfMultiplicityAnalyzers: // URGENT: get all the cycles associated with each analyzer, restoring into the correct key->result pair
         foreach (Cycle c in cl)  // restore Alpha Beta coefficients on each mcr on each cycle for later per-cycle DTC rate recalculation
         {
             IEnumerator iter = c.CountingAnalysisResults.GetMultiplicityEnumerator();
             while (iter.MoveNext())
             try
             {
                 Multiplicity mkey = (Multiplicity)((KeyValuePair<SpecificCountingAnalyzerParams, object>)(iter.Current)).Key;  // clean up this syntax, it's silly
                 MultiplicityCountingRes mcr = (MultiplicityCountingRes)((KeyValuePair<SpecificCountingAnalyzerParams, object>)(iter.Current)).Value;
                 LMRawAnalysis.SDTMultiplicityCalculator.SetAlphaBeta(mkey, mcr);
             }
             catch (Exception)
             { }
         }
     }
     else
     {
         cl = NC.App.DB.GetCycles(m.Detector, m.MeasurementId, m.AcquireState.data_src);
         uint maximalmax = 0;
         if (m.Detector.AB.Unset)
         {
             foreach (Cycle c in cl)
                 maximalmax = (uint)Math.Max(maximalmax, c.MultiplicityResults(m.Detector.MultiplicityParams).MaxBins);
             ABKey akey = new ABKey(m.Detector.MultiplicityParams, maximalmax); // max of all cycles mcr.MaxBins
             LMRawAnalysis.SDTMultiplicityCalculator.SetAlphaBeta(akey, m.Detector.AB);
         }
         ABKey abkey = new ABKey(m.Detector.MultiplicityParams, m.Detector.AB.MaxBins);
         foreach (Cycle c in cl) // restore Alpha Beta coefficients on each cycle
             LMRawAnalysis.SDTMultiplicityCalculator.SetAlphaBeta(abkey, c.MultiplicityResults(m.Detector.MultiplicityParams).AB);
     }
     m.Cycles = new CycleList();
     m.CurrentRepetition = 0;
     foreach (Cycle c in cl)
     {
         m.CurrentRepetition++;
         m.Add(c);
         IEnumerator iter = c.CountingAnalysisResults.GetMultiplicityEnumerator();
         while (iter.MoveNext())
             try
             {
                 Multiplicity mkey = (Multiplicity)((KeyValuePair<SpecificCountingAnalyzerParams, object>)(iter.Current)).Key;  // clean up this syntax, it's silly
                 MultiplicityCountingRes mcr = (MultiplicityCountingRes)((KeyValuePair<SpecificCountingAnalyzerParams, object>)(iter.Current)).Value;
                 if (CycleProcessing.ConductStep(CycleProcessing.CycleStep.Deadtime, m.MeasOption))
                     CycleProcessing.DeadtimeCorrection(m, mkey, mcr, did: m.Detector.Id, isCycle: false);
             }
             catch (Exception)
             { }
         CycleProcessing.ApplyTheCycleConditioningSteps(c, m);
         m.CycleStatusTerminationCheck(c);
     }
        m.CalculateMeasurementResults();
 }
Exemplo n.º 7
0
        /// <summary>
        /// Calc alpha beta, save result in cache
        /// NEXT: extend with Numerics.BigInteger replacing BigFloat, as per above (for when phi is non-zero)
        /// </summary>
        /// <param name="key">three values needed for alpha beta (max bin count, gatewidth, phi aka multiplicity T) </param>
        /// <param name="AB">The alpha beta array as used on detectors and multiplicity counting results</param>
        public static void SetAlphaBeta(ABKey key, AlphaBeta AB)
        {
            AlphaBeta _AB = AlphaBetaCache.GetAlphaBeta(key);
            if (_AB != null)
            {
                AB.α = _AB.α;
                AB.β = _AB.β;
                return;
            }

            if (key.bins != AB.α.Length)
                AB.Resize((int)key.bins + 1);

            AB.α[0] = 0.0;
            AB.β[0] = 0.0;
            if (key.deadTimeCoefficientTinNanoSecs == 0.0)
            {
                double n = 0;
                for (uint i = 1; i < key.bins; i++)
                {
                    n = i;
                    AB.α[i] = n;
                    AB.β[i] = (n * (n - 1.0)) / 2.0;
                }
            } else if (key.gateWidthTics != 0.0)
            {
                uint biggestKey = key.bins - 1;
                AB.Init((int)key.bins);
                if (biggestKey <= 1)
                    goto cache;

                double gateInSeconds = key.gateWidthTics * 1e-7;
                double phi = (key.deadTimeCoefficientTinNanoSecs / 1E9) / gateInSeconds;

                AB.α[0] = 0.0;
                AB.α[1] = 1.0;
                AB.β[0] = 0.0;
                AB.β[1] = 0.0;

                if (biggestKey > 1)
                {
                    for (int n = 2; n <= biggestKey; n++)
                    {
                        if (phi > 1e-20)
                        {
                            AB.α[n] = 1.0;
                            double alphaCoeff = 0;
                            for (int k = 0; k <= (n - 2); k++)
                            {
                                alphaCoeff = binomialCoefficient(n - 1, k + 1)
                                            * Math.Pow((k + 1) * phi, k)
                                            / Math.Pow(1.0 - ((k + 1) * phi), k + 2);
                                AB.α[n] += alphaCoeff;
                            }
                        } else
                        {
                            AB.α[n] = 1.0;
                        }
                    }

                    AB.β[0] = 0.0;
                    AB.β[1] = 0.0;
                    AB.β[2] = AB.α[2] - 1.0;
                    for (int n = 3; n <= biggestKey; n++)
                    {
                        if (phi > 1e-20)
                        {
                            AB.β[n] = AB.α[n] - 1.0;
                            for (int k = 0; k <= (n - 3); k++)
                            {
                                double betaCoeff;
                                betaCoeff = binomialCoefficient(n - 1, k + 2)
                                            * (k + 1)
                                            * Math.Pow((k + 2) * phi, k)
                                            / Math.Pow(1.0 - ((k + 2) * phi), k + 3);
                                AB.β[n] += betaCoeff;
                            }
                        } else
                        {
                            AB.β[n] = 0.0;
                        }
                    }
                }
            }
            cache:		AlphaBetaCache.AddAlphaBeta(key, AB);
        }
Exemplo n.º 8
0
 public static void SetAlphaBeta(Multiplicity mkey, MultiplicityCountingRes mcr)
 {
     ABKey abkey = new ABKey(mkey, mcr);
     SetAlphaBeta(abkey, mcr.AB);
 }