Yamato

SWATH-MS QC metrics generation tools

MzmlReader

An optimised library to extract chromatograms and metadata from an MZML file. Uses the fast, forward-only System.Xml.XmlReader class.

A C# library to serialise quality control metrics to MZQC.

A C# library to deserialise transisition libraries, including Thermo, Skyline and TraML formats.

A Quameter-based SWATH metrics library
Author: Marina Kriek
pauwmarina@sun.ac.za

A library to try and figure out if your DIA proteomics experiment is going okay
Author: Paul Brack
paul.brack@manchester.ac.uk

A command line application to generate SwaMe and Prognosticator metrics.

Name		Name	Last commit message	Last commit date
Latest commit History 612 Commits
.github/workflows		.github/workflows
CVLibrarian		CVLibrarian
CWT		CWT
CrawdadSharp @ dbab342		CrawdadSharp @ dbab342
Docker		Docker
LibraryParser.Test		LibraryParser.Test
LibraryParser		LibraryParser
MzmlParser.Test		MzmlParser.Test
MzmlParser		MzmlParser
MzqcGenerator.Test		MzqcGenerator.Test
MzqcGenerator		MzqcGenerator
SwaMe.Console		SwaMe.Console
SwaMe.Desktop		SwaMe.Desktop
SwaMe.Pipeline		SwaMe.Pipeline
SwaMe.Prognosticator		SwaMe.Prognosticator
SwaMe.Test		SwaMe.Test
SwaMe		SwaMe
container		container
.gitignore		.gitignore
.gitmodules		.gitmodules
LICENSE		LICENSE
README.md		README.md
Yamato.sln		Yamato.sln
iRTPeptidesTemplate.tsv		iRTPeptidesTemplate.tsv
mzqcreader.html		mzqcreader.html