protected virtual void UpdateReaction(IObjectBase reactionAsEntity, IBaseNode reactionNodeAsBaseNode)
{
var reaction = reactionAsEntity.DowncastTo <IReaction>();
var reactionNode = reactionNodeAsBaseNode.DowncastTo <ReactionNode>();
reactionNode.ClearLinks();
var newEductDistance = new PointF(-70, 0);
var newProductDistance = new PointF(30, 0);
var newModifierDistance = new PointF(-30, -30);
foreach (var rp in reaction.Educts)
{
createReactionLink(ReactionLinkType.Educt, reactionNode, moleculeNodeFor(rp.Partner.Id, reactionNode, newEductDistance));
}
foreach (var rp in reaction.Products)
{
createReactionLink(ReactionLinkType.Product, reactionNode, moleculeNodeFor(rp.Partner.Id, reactionNode, newProductDistance));
}
foreach (var modifierName in reaction.ModifierNames)
{
// modifier are in the same container as reaction (and not in subcontainers)
var modifier = getModifierNode(reaction, modifierName);
if (modifier != null)
{
createReactionLink(ReactionLinkType.Modifier, reactionNode, moleculeNodeFor(modifier.Id, reactionNode, newModifierDistance));
}
}
}
// signature is necessary for use as argument in RegisterUpdateMethod
public void UpdateReactionBuilder(IObjectBase reactionAsObjectBase, IBaseNode reactionNodeAsBaseNode)
{
var reactionBuilder = reactionAsObjectBase.DowncastTo <IReactionBuilder>();
var reactionNode = reactionNodeAsBaseNode.DowncastTo <ReactionNode>();
reactionNode.ClearLinks();
foreach (var rpb in reactionBuilder.Educts)
{
createReactionLink(ReactionLinkType.Educt, reactionNode, getMoleculeNode(rpb.MoleculeName, reactionNode.Location));
}
foreach (var rpb in reactionBuilder.Products)
{
createReactionLink(ReactionLinkType.Product, reactionNode, getMoleculeNode(rpb.MoleculeName, reactionNode.Location));
}
foreach (var modifierName in reactionBuilder.ModifierNames)
{
createReactionLink(ReactionLinkType.Modifier, reactionNode, getMoleculeNode(modifierName, reactionNode.Location));
}
reactionNode.SetColorFrom(DiagramOptions.DiagramColors);
}
private void updateObserver(IObjectBase observerAsEntity, IBaseNode observerNodeAsBaseNode)
{
var observer = observerAsEntity.DowncastTo <IObserver>();
var observerNode = observerNodeAsBaseNode.DowncastTo <ObserverNode>();
observerNode.ClearLinks();
foreach (var oRef in observer.Formula.ObjectReferences)
{
var refId = oRef.Object.Id;
var refParentId = oRef.Object.ParentContainer.Id;
var moleculeNode = DiagramModel.GetNode <MoleculeNode>(refId);
// if object reference is not molecule amount itself, it could be a child of molecule amount, e.g. a concentration
if (moleculeNode == null)
{
moleculeNode = DiagramModel.GetNode <MoleculeNode>(refParentId);
}
if (moleculeNode != null)
{
createObserverLink(observerNode, moleculeNode);
}
}
}