Esempio n. 1
0
        void treeDataGridView_CellDoubleClick (object sender, TreeDataGridViewCellEventArgs e)
        {
            if (e.ColumnIndex < 0 || e.RowIndexHierarchy.Count > 1 || e.RowIndexHierarchy.First() < 0)
                return;

            var row = GetRowFromRowHierarchy(e.RowIndexHierarchy) as AnalysisRow;

            var newDataFilter = new DataFilter
            {
                FilterSource = this,
                Analysis = new List<Analysis> { row.Analysis }
            };

            if (AnalysisViewFilter != null)
                AnalysisViewFilter(this, new ViewFilterEventArgs(newDataFilter));
        }
        void dataGridView_CellEndEdit (object sender, TreeDataGridViewCellEventArgs e)
        {
            var row = dataGridView[e.ColumnIndex, e.RowIndexHierarchy].OwningRow;
            var importSettingsRow = rows[e.RowIndexHierarchy[0]];
            var analysis = importSettingsRow.Analysis;

            if (e.ColumnIndex == analysisNameColumn.Index)
            {
                if (String.IsNullOrEmpty((string) row.Cells[analysisNameColumn.Index].Value))
                    row.Cells[analysisNameColumn.Index].Value = analysis.name = importSettingsRow.OriginalAnalysisName;
            }
            else if (e.ColumnIndex == databaseColumn.Index)
            {
                analysis.importSettings.proteinDatabaseFilepath = (string) row.Cells[databaseColumn.Index].Value;
                row.Cells[databaseColumn.Index].Style.BackColor = File.Exists((string) row.Cells[databaseColumn.Index].Value) ? SystemColors.Window : Color.LightSalmon;

                // also set all databases equal to the uneditedValue
                string originalFilename = Path.GetFileName(uneditedValue) ?? uneditedValue;
                foreach (var importSettingsRow2 in rows)
                {
                    if (importSettingsRow == importSettingsRow2) continue;
                    string rowFilename = importSettingsRow2.ImportSettings.proteinDatabaseFilepath;
                    rowFilename = Path.GetFileName(rowFilename) ?? rowFilename;
                    if (rowFilename == originalFilename)
                        importSettingsRow2.ImportSettings.proteinDatabaseFilepath = importSettingsRow.ImportSettings.proteinDatabaseFilepath;
                }
            }
            else if (e.ColumnIndex == decoyPrefixColumn.Index)
            {
                analysis.importSettings.qonverterSettings.DecoyPrefix = (string) row.Cells[decoyPrefixColumn.Index].Value;
                importSettingsRow.DecoyPrefix = (string)row.Cells[decoyPrefixColumn.Index].Value;
            }
            else if (e.ColumnIndex == maxRankColumn.Index &&
                     !Int32.TryParse(row.Cells[maxRankColumn.Index].Value.ToString(), out analysis.importSettings.maxResultRank) ||
                     analysis.importSettings.maxResultRank < 1)
                row.Cells[maxRankColumn.Index].Value = analysis.importSettings.maxResultRank = Convert.ToInt32(uneditedValue);
            else if (e.ColumnIndex == maxFDRColumn.Index &&
                     !Double.TryParse(row.Cells[maxFDRColumn.Index].Value.ToString(), out analysis.importSettings.maxQValue) ||
                     analysis.importSettings.maxQValue < 0 || analysis.importSettings.maxQValue > 1)
                row.Cells[maxFDRColumn.Index].Value = analysis.importSettings.maxQValue = Convert.ToDouble(uneditedValue);
            else if (e.ColumnIndex == qonverterSettingsColumn.Index)
            {
                analysis.importSettings.qonverterSettings = qonverterSettingsByName[(string) row.Cells[qonverterSettingsColumn.Index].Value].ToQonverterSettings();
                analysis.importSettings.qonverterSettings.DecoyPrefix = (string) row.Cells[decoyPrefixColumn.Index].Value;
                importSettingsRow.DecoyPrefix = (string)row.Cells[decoyPrefixColumn.Index].Value;
            }
            else if (e.ColumnIndex == ignoreUnmappedPeptidesColumn.Index)
                analysis.importSettings.ignoreUnmappedPeptides = (bool) row.Cells[ignoreUnmappedPeptidesColumn.Index].Value;
        }
Esempio n. 3
0
        void dataGridView_CellEndEdit(object sender, TreeDataGridViewCellEventArgs e)
        {
            var row = dataGridView[e.ColumnIndex, e.RowIndexHierarchy].OwningRow;
            var importSettingsRow = rows[e.RowIndexHierarchy[0]];
            var analysis          = importSettingsRow.Analysis;

            if (e.ColumnIndex == analysisNameColumn.Index)
            {
                if (String.IsNullOrEmpty((string)row.Cells[analysisNameColumn.Index].Value))
                {
                    row.Cells[analysisNameColumn.Index].Value = analysis.name = importSettingsRow.OriginalAnalysisName;
                }
            }
            else if (e.ColumnIndex == databaseColumn.Index)
            {
                analysis.importSettings.proteinDatabaseFilepath = (string)row.Cells[databaseColumn.Index].Value;
                row.Cells[databaseColumn.Index].Style.BackColor = File.Exists((string)row.Cells[databaseColumn.Index].Value) ? SystemColors.Window : Color.LightSalmon;

                // also set all databases equal to the uneditedValue
                string originalFilename = Path.GetFileName(uneditedValue) ?? uneditedValue;
                foreach (var importSettingsRow2 in rows)
                {
                    if (importSettingsRow == importSettingsRow2)
                    {
                        continue;
                    }
                    string rowFilename = importSettingsRow2.ImportSettings.proteinDatabaseFilepath;
                    rowFilename = Path.GetFileName(rowFilename) ?? rowFilename;
                    if (rowFilename == originalFilename)
                    {
                        importSettingsRow2.ImportSettings.proteinDatabaseFilepath = importSettingsRow.ImportSettings.proteinDatabaseFilepath;
                    }
                }
            }
            else if (e.ColumnIndex == decoyPrefixColumn.Index)
            {
                analysis.importSettings.qonverterSettings.DecoyPrefix = (string)row.Cells[decoyPrefixColumn.Index].Value;
                importSettingsRow.DecoyPrefix = (string)row.Cells[decoyPrefixColumn.Index].Value;
            }
            else if (e.ColumnIndex == maxRankColumn.Index &&
                     !Int32.TryParse(row.Cells[maxRankColumn.Index].Value.ToString(), out analysis.importSettings.maxResultRank) ||
                     analysis.importSettings.maxResultRank < 1)
            {
                row.Cells[maxRankColumn.Index].Value = analysis.importSettings.maxResultRank = Convert.ToInt32(uneditedValue);
            }
            else if (e.ColumnIndex == maxFDRColumn.Index &&
                     !Double.TryParse(row.Cells[maxFDRColumn.Index].Value.ToString(), out analysis.importSettings.maxQValue) ||
                     analysis.importSettings.maxQValue < 0 || analysis.importSettings.maxQValue > 1)
            {
                row.Cells[maxFDRColumn.Index].Value = analysis.importSettings.maxQValue = Convert.ToDouble(uneditedValue);
            }
            else if (e.ColumnIndex == qonverterSettingsColumn.Index)
            {
                analysis.importSettings.qonverterSettings             = qonverterSettingsByName[(string)row.Cells[qonverterSettingsColumn.Index].Value].ToQonverterSettings();
                analysis.importSettings.qonverterSettings.DecoyPrefix = (string)row.Cells[decoyPrefixColumn.Index].Value;
                importSettingsRow.DecoyPrefix = (string)row.Cells[decoyPrefixColumn.Index].Value;
            }
            else if (e.ColumnIndex == ignoreUnmappedPeptidesColumn.Index)
            {
                analysis.importSettings.ignoreUnmappedPeptides = (bool)row.Cells[ignoreUnmappedPeptidesColumn.Index].Value;
            }
        }
Esempio n. 4
0
        void treeDataGridView_CellDoubleClick (object sender, TreeDataGridViewCellEventArgs e)
        {
            if (e.ColumnIndex < 0 || e.RowIndexHierarchy.First() < 0)
                return;

            Row row = GetRowFromRowHierarchy(e.RowIndexHierarchy);

            var newDataFilter = new DataFilter() { FilterSource = this };

            if (row is SpectrumSourceGroupRow)
                newDataFilter.SpectrumSourceGroup = new List<SpectrumSourceGroup>() { (row as SpectrumSourceGroupRow).SpectrumSourceGroup };
            else if (row is SpectrumSourceRow)
                newDataFilter.SpectrumSource = new List<SpectrumSource>() { (row as SpectrumSourceRow).SpectrumSource };
            else if (row is SpectrumRow)
                newDataFilter.Spectrum = new List<Spectrum>() { (row as SpectrumRow).Spectrum };
            else if (row is AnalysisRow)
                newDataFilter.Analysis = new List<Analysis>() { (row as AnalysisRow).Analysis };
            else if (row is PeptideRow)
                newDataFilter.Peptide = new List<Peptide>() { (row as PeptideRow).Peptide };
            else if (row is ChargeRow)
                newDataFilter.Charge = new List<int>() { (row as ChargeRow).Charge };
            else if (row is PeptideSpectrumMatchRow)
            {
                if (SpectrumViewVisualize != null)
                    SpectrumViewVisualize(this, new SpectrumViewVisualizeEventArgs(session, row as PeptideSpectrumMatchRow));
                return;
            }

            if (SpectrumViewFilter != null)
                SpectrumViewFilter(this, new ViewFilterEventArgs(newDataFilter));
        }