public void ValidateProteinAlphabetGetBasicSymbols()
{
ISequence seq = new Sequence(Alphabets.Protein, "AGCTX");
ProteinAlphabet alp = ProteinAlphabet.Instance;
ISequenceItem item = seq[4];
Assert.IsNotNull(alp.GetBasicSymbols(item));
item = seq[3];
Assert.IsNotNull(alp.GetBasicSymbols(item));
item = seq[3];
Assert.IsNotNull(alp.GetBasicSymbols(item));
// Logs to the NUnit GUI window
ApplicationLog.WriteLine(
"Alphabets BVT: Validation of GetBasicSymbols() method completed successfully.");
Console.WriteLine(
"Alphabets BVT: Validation of GetBasicSymbols() method completed successfully.");
}
public void InValidateProteinAlphabetGetBasicSymbols()
{
ProteinAlphabet alp = ProteinAlphabet.Instance;
try
{
alp.GetBasicSymbols(null);
Assert.Fail();
}
catch (ArgumentException)
{
// Logs to the NUnit GUI window
ApplicationLog.WriteLine(
"Alphabets P2: Validation of GetBasicSymbols() method completed successfully.");
Console.WriteLine(
"Alphabets P2: Validation of GetBasicSymbols() method completed successfully.");
}
}