public void TestConstructor()
{
EcellObservedData data = new EcellObservedData();
Assert.IsNotNull(data, "Constructor of type, EcellObservedData failed to create instance.");
Assert.AreEqual("", data.Key, "Key is unexpected value.");
Assert.AreEqual(100.0, data.Max, "Max is unexpected value.");
Assert.AreEqual(0, data.Min, "Min is unexpected value.");
Assert.AreEqual(100.0, data.Differ, "Differ is unexpected value.");
Assert.AreEqual(0.5, data.Rate, "Rate is unexpected value.");
Assert.AreEqual("Ecell.Objects.EcellObservedData", data.GetType().ToString(), "GetType method returned unexpected value.");
Assert.IsNotNull(data.ToString(), "ToString method returned unexpected value.");
Assert.IsNotNull(data.GetHashCode(), "ToString method returned unexpected value.");
data.Key = "Variable:/S0:Value:MolarConc";
data.Max = 10;
data.Min = 1;
data.Differ = 9;
data.Rate = 0.8;
Assert.AreEqual("Variable:/S0:Value:MolarConc", data.Key, "Key is unexpected value.");
Assert.AreEqual(10, data.Max, "Max is unexpected value.");
Assert.AreEqual(1.0, data.Min, "Min is unexpected value.");
Assert.AreEqual(9.0, data.Differ, "Differ is unexpected value.");
Assert.AreEqual(0.8, data.Rate, "Rate is unexpected value.");
Assert.IsNotNull(data.GetHashCode(), "ToString method returned unexpected value.");
}
public void TestCopy()
{
EcellObservedData data = new EcellObservedData();
Assert.IsNotNull(data, "Constructor of type, EcellObservedData failed to create instance.");
EcellObservedData newData = data.Copy();
Assert.IsNotNull(newData, "Constructor of type, EcellObservedData failed to create instance.");
Assert.AreEqual("", newData.Key, "Key is unexpected value.");
Assert.AreEqual(100.0, newData.Max, "Max is unexpected value.");
Assert.AreEqual(0, newData.Min, "Min is unexpected value.");
Assert.AreEqual(100.0, newData.Differ, "Differ is unexpected value.");
Assert.AreEqual(0.5, newData.Rate, "Rate is unexpected value.");
Assert.AreEqual("Ecell.Objects.EcellObservedData", newData.GetType().ToString(), "GetType method returned unexpected value.");
Assert.IsNotNull(newData.ToString(), "ToString method returned unexpected value.");
data = new EcellObservedData("Variable:/S0:Value:MolarConc", 0.75, 0.25, 0.5, 0.5);
Assert.IsNotNull(data, "Constructor of type, EcellObservedData failed to create instance.");
newData = data.Copy();
Assert.IsNotNull(newData, "Constructor of type, EcellObservedData failed to create instance.");
Assert.AreEqual("Variable:/S0:Value:MolarConc", newData.Key, "Key is unexpected value.");
Assert.AreEqual(0.75d, newData.Max, "Max is unexpected value.");
Assert.AreEqual(0.25d, newData.Min, "Min is unexpected value.");
Assert.AreEqual(0.5d, newData.Differ, "Differ is unexpected value.");
Assert.AreEqual(0.5d, newData.Rate, "Rate is unexpected value.");
Assert.AreEqual("Ecell.Objects.EcellObservedData", newData.GetType().ToString(), "GetType method returned unexpected value.");
Assert.IsNotNull(newData.ToString(), "ToString method returned unexpected value.");
}
/// <summary>
/// Set the observed data.
/// </summary>
/// <param name="fullPN">the FullPN of observed data.</param>
/// <param name="max">the max of observed data.</param>
/// <param name="min">the min of observed data.</param>
/// <param name="differ">the differ of observed data.</param>
/// <param name="rate">the rate of observed data.</param>
public void SetObservedData(string fullPN, double max, double min,
double differ, double rate)
{
EcellObservedData d = new EcellObservedData(fullPN, max, min, differ, rate);
DataManager.SetObservedData(d);
}
/// <summary>
/// Remove the observed data.
/// </summary>
/// <param name="fullPN">the FullPN.</param>
public void RemoveObservedData(string fullPN)
{
EcellObservedData d = new EcellObservedData(fullPN, 0.0);
DataManager.RemoveObservedData(d);
}
/// <summary>
/// The event sequence when the user set and change the observed data.
/// </summary>
/// <param name="data">The observed data.</param>
public void SetObservedData(EcellObservedData data)
{
if (m_observedList.ContainsKey(data.Key))
{
m_observedList[data.Key] = data;
}
else
m_observedList.Add(data.Key, data);
m_env.PluginManager.SetObservedData(data);
}
/// <summary>
/// The event sequence when the user remove the data from the list of observed data.
/// </summary>
/// <param name="data">The removed observed data.</param>
public void RemoveObservedData(EcellObservedData data)
{
if (m_observedList.ContainsKey(data.Key))
m_observedList.Remove(data.Key);
m_env.PluginManager.RemoveObservedData(data);
}
/// <summary>
/// The event sequence when the user set and change the observed data.
/// </summary>
/// <param name="data">The observed data.</param>
public void SetObservedData(EcellObservedData data)
{
foreach (IAnalysis p in m_analysisList)
{
p.SetObservedData(data);
}
}
public void TearDown()
{
_unitUnderTest = null;
}
/// <summary>
/// Notify to change the observed data to DataManager.
/// </summary>
/// <param name="data">the changed observed data.</param>
public void NotifyObservedDataChanged(EcellObservedData data)
{
DataManager.SetObservedData(data);
}
/// <summary>
/// Enter the drag object on DataGridView of the observed data.
/// </summary>
/// <param name="sender">DataGridView.</param>
/// <param name="e">DragEventArgs</param>
private void ObservedDragDrop(object sender, DragEventArgs e)
{
object obj = e.Data.GetData("Ecell.Objects.EcellDragObject");
if (obj == null) return;
EcellDragObject dobj = obj as EcellDragObject;
foreach (EcellDragEntry ent in dobj.Entries)
{
EcellObject t = m_owner.DataManager.GetEcellObject(dobj.ModelID, ent.Key, ent.Type);
foreach (EcellData d in t.Value)
{
if (d.EntityPath.Equals(ent.Path) && d.Logable && d.Value.IsDouble)
{
EcellObservedData data =
new EcellObservedData(d.EntityPath, Double.Parse(d.Value.ToString()));
m_owner.Environment.DataManager.SetObservedData(data);
break;
}
}
}
}
/// <summary>
/// Set the observed data.
/// </summary>
/// <param name="data">the set observed data.</param>
public void SetObservedData(EcellObservedData data)
{
foreach (DataGridViewRow r1 in bifurcationObservedDataGrid.Rows)
{
string fullPN = r1.Cells[observedFullPNColumn.Index].Value.ToString();
if (fullPN.Equals(data.Key))
{
// max
int index = dataGridViewTextBoxColumn6.Index;
r1.Cells[index].Value = data.Max;
// min
index = dataGridViewTextBoxColumn7.Index;
r1.Cells[index].Value = data.Min;
// differ
index = dataGridViewTextBoxColumn8.Index;
r1.Cells[index].Value = data.Differ;
// rate
index = dataGridViewTextBoxColumn9.Index;
r1.Cells[index].Value = data.Rate;
r1.Tag = data.Copy();
return;
}
}
DataGridViewRow r = new DataGridViewRow();
DataGridViewTextBoxCell c1 = new DataGridViewTextBoxCell();
c1.Value = data.Key;
r.Cells.Add(c1);
DataGridViewTextBoxCell c2 = new DataGridViewTextBoxCell();
c2.Value = data.Max;
r.Cells.Add(c2);
DataGridViewTextBoxCell c3 = new DataGridViewTextBoxCell();
c3.Value = data.Min;
r.Cells.Add(c3);
DataGridViewTextBoxCell c4 = new DataGridViewTextBoxCell();
c4.Value = data.Differ;
r.Cells.Add(c4);
DataGridViewTextBoxCell c5 = new DataGridViewTextBoxCell();
c5.Value = data.Rate;
r.Cells.Add(c5);
r.Tag = data.Copy();
bifurcationObservedDataGrid.Rows.Add(r);
}
/// <summary>
/// Remove the observed data.
/// </summary>
/// <param name="data">the removed observed data.</param>
public void RemoveObservedData(EcellObservedData data)
{
foreach (DataGridViewRow r in bifurcationObservedDataGrid.Rows)
{
string fullPN = r.Cells[observedFullPNColumn.Index].Value.ToString();
if (fullPN.Equals(data.Key))
{
bifurcationObservedDataGrid.Rows.Remove(r);
return;
}
}
}
public void TestObservedData()
{
_env.DataManager.LoadProject(TestConstant.Project_Drosophila);
string path = "Variable:/CELL:SIZE:Value";
EcellObservedData data = new EcellObservedData(path, 0.1);
_unitUnderTest.SetObservedData(data);
_unitUnderTest.RemoveObservedData(data);
}
public void TestSetObservedData()
{
_unitUnderTest.LoadProject(TestConstant.Project_Drosophila);
string fullPN = "Variable:/CELL/CYTOPLASM:M:Value";
Assert.IsFalse(_unitUnderTest.IsContainsObservedData(fullPN));
EcellObservedData observedData = new EcellObservedData(fullPN, 0.2);
_unitUnderTest.SetObservedData(observedData);
_unitUnderTest.SetObservedData(observedData);
Assert.IsTrue(_unitUnderTest.IsContainsObservedData(fullPN));
Assert.AreEqual(_unitUnderTest.GetObservedData()[0], _unitUnderTest.GetObservedData(fullPN));
_unitUnderTest.RemoveObservedData(observedData);
}
public void TestCheckParameterData()
{
_unitUnderTest.LoadProject(TestConstant.Project_Drosophila);
string fullPN = "Variable:/CELL/CYTOPLASM:M:Value";
Assert.IsFalse(_unitUnderTest.IsContainsObservedData(fullPN));
EcellObservedData observedData = new EcellObservedData(fullPN, 0.2);
_unitUnderTest.SetObservedData(observedData);
EcellParameterData parameterData = new EcellParameterData(fullPN, 0.2);
_unitUnderTest.SetParameterData(parameterData);
EcellObject variable = _unitUnderTest.GetEcellObject("Drosophila", "/CELL/CYTOPLASM:M", "Variable");
variable.Key = "/CELL:M";
_unitUnderTest.DataChanged("Drosophila", "/CELL/CYTOPLASM:M", "Variable", variable);
}
public void TestEquals()
{
EcellObservedData data1 = new EcellObservedData("Variable:/S0:Value:MolarConc", 0.75, 0.25, 0.5, 0.5);
EcellObservedData data2 = new EcellObservedData("Variable:/S0:Value1:MolarConc", 0.75, 0.25, 0.5, 0.5);
EcellObservedData data3 = new EcellObservedData("Variable:/S0:Value:MolarConc", 20, 0, 20, 0.8);
object obj = new object();
Assert.AreEqual(false, data1.Equals(data2), "Equals method returned unexpected value.");
Assert.AreEqual(false, data1.Equals(obj), "Equals method returned unexpected value.");
Assert.AreEqual(true, data1.Equals(data3), "Equals method returned unexpected value.");
}
public void SetUp()
{
_unitUnderTest = new EcellObservedData();
}
/// <summary>
/// The event sequence when the user remove the data from the list of observed data.
/// </summary>
/// <param name="data">The removed observed data.</param>
public void RemoveObservedData(EcellObservedData data)
{
m_observedList.Remove(data.Key);
m_bifurcationDialog.RemoveObservedData(data);
m_robustDialog.RemoveObservedData(data);
}
/// <summary>
/// The event sequence when the user set and change the observed data.
/// </summary>
/// <param name="data">The observed data.</param>
public void SetObservedData(EcellObservedData data)
{
if (!m_observedList.ContainsKey(data.Key))
m_observedList.Add(data.Key, null);
m_bifurcationDialog.SetObservedData(data);
m_robustDialog.SetObservedData(data);
}
/// <summary>
/// Set the observed data properties in the analysis parameter file.
/// </summary>
/// <param name="observers">thec current node.</param>
private void SetObservedData(XmlNode observers)
{
foreach (XmlNode node in observers.ChildNodes)
{
if (!node.Name.Equals(AnalysisParameterConstants.xObservedData))
continue;
string fullPN = GetElementString(node, AnalysisParameterConstants.xFullPN);
double max = Double.Parse(GetElementString(node, AnalysisParameterConstants.xMax));
double min = Double.Parse(GetElementString(node, AnalysisParameterConstants.xMin));
double differ = Double.Parse(GetElementString(node, AnalysisParameterConstants.xDiffer));
double rate = Double.Parse(GetElementString(node, AnalysisParameterConstants.xRate));
EcellObservedData o = new EcellObservedData(fullPN, max, min, differ, rate);
m_analysis.ObservedDataList.Add(o);
}
}
