public void LoadAllMSMS(List<QPeptide> AllMSMS)
{
iLog.Log("Loading All MS/MS Entries");
iLog.RepProgress(0);
SQLiteCommand Select = new SQLiteCommand(
"Select MascotScan, MascotMZ, MascotScore, MascotRT, TheorIsoRatio, Charge, "+
"IPI, ipis, Sequence, Peptides, ModDesc, ModMass, [Case] From AllMSMS "+
"Order by IPI",con);
SQLiteDataReader Reader = Select.ExecuteReader();
int Count = 0;
while(Reader.Read()){
QPeptide Pept = new QPeptide();
Pept.MascotScan = Reader.GetInt32(0);
Pept.MascotMZ = Reader.GetDouble(1);
Pept.MascotScore = Reader.GetDouble(2);
Pept.MascotRT = Reader.GetDouble(3);
Pept.TheorIsotopeRatio = Reader.GetDouble(4);
Pept.Charge = Reader.GetInt32(5);
Pept.IPI = Reader.IsDBNull(6) ? "" : Reader.GetString(6);
//Pept.IPIs = Reader.GetString(7);
Pept.Sequence = Reader.IsDBNull(8) ? "" : Reader.GetString(8);
Pept.peptides = Reader.GetInt32(9);
Pept.ModDesk = Reader.GetString(10);
Pept.ModMass = Reader.GetDouble(11);
Pept.Case = Reader.GetString(12);
AllMSMS.Add(Pept);
Count++;
//if (Count%100 == 0){
// iLog.RepProgress(Count*100/Reader.RecordsAffected);
//}
}
}
public void LoadMascots(List<QPeptide> Mascots)
{
iLog.Log("Loading Mascot Peptides");
iLog.RepProgress(0);
SQLiteCommand Select = new SQLiteCommand(
"Select MascotScan, MascotMZ, MascotScore, MascotRT, TheorIsoRatio, Charge, "+
"IPI, ipis, Sequence, Peptides, ModDesc, ModMass, [Case] From Mascots "+
"Order by IPI",con);
SQLiteDataReader Reader = Select.ExecuteReader();
while (Reader.Read()){
QPeptide Pept = new QPeptide();
Pept.MascotScan = Reader.GetInt32(0);
Pept.MascotMZ = Reader.GetDouble(1);
Pept.MascotScore = Reader.GetDouble(2);
Pept.MascotRT = Reader.GetDouble(3);
Pept.TheorIsotopeRatio = Reader.GetDouble(4);
Pept.Charge = Reader.GetInt32(5);
Pept.IPI = Reader.GetString(6);
//Pept.IPIs = Reader.GetString(7);
Pept.Sequence = Reader.GetString(8);
Pept.peptides = Reader.GetInt32(9);
Pept.ModDesk = Reader.GetString(10);
Pept.ModMass = Reader.GetDouble(11);
Pept.Case = Reader.GetString(12);
Mascots.Add(Pept);
}
}
