static public double[] GetParticleForces(VectorField <SinglePhaseField> U, SinglePhaseField P,
LevelSetTracker LsTrk,
double muA)
{
int D = LsTrk.GridDat.SpatialDimension;
// var UA = U.Select(u => u.GetSpeciesShadowField("A")).ToArray();
var UA = U.ToArray();
int RequiredOrder = U[0].Basis.Degree * 3 + 2;
//int RequiredOrder = LsTrk.GetXQuadFactoryHelper(momentFittingVariant).GetCachedSurfaceOrders(0).Max();
//Console.WriteLine("Order reduction: {0} -> {1}", _RequiredOrder, RequiredOrder);
//if (RequiredOrder > agg.HMForder)
// throw new ArgumentException();
Console.WriteLine("Forces coeff: {0}, order = {1}", LsTrk.CutCellQuadratureType, RequiredOrder);
ConventionalDGField pA = null;
//pA = P.GetSpeciesShadowField("A");
pA = P;
double[] forces = new double[D];
for (int d = 0; d < D; d++)
{
ScalarFunctionEx ErrFunc = delegate(int j0, int Len, NodeSet Ns, MultidimensionalArray result) {
int K = result.GetLength(1); // No nof Nodes
MultidimensionalArray Grad_UARes = MultidimensionalArray.Create(Len, K, D, D);;
MultidimensionalArray pARes = MultidimensionalArray.Create(Len, K);
// Evaluate tangential velocity to level-set surface
var Normals = LsTrk.DataHistories[0].Current.GetLevelSetNormals(Ns, j0, Len);
for (int i = 0; i < D; i++)
{
UA[i].EvaluateGradient(j0, Len, Ns, Grad_UARes.ExtractSubArrayShallow(-1, -1, i, -1), 0, 1);
}
pA.Evaluate(j0, Len, Ns, pARes);
if (LsTrk.GridDat.SpatialDimension == 2)
{
for (int j = 0; j < Len; j++)
{
for (int k = 0; k < K; k++)
{
double acc = 0.0;
// pressure
switch (d)
{
case 0:
acc += pARes[j, k] * Normals[j, k, 0];
acc -= (2 * muA) * Grad_UARes[j, k, 0, 0] * Normals[j, k, 0];
acc -= (muA) * Grad_UARes[j, k, 0, 1] * Normals[j, k, 1];
acc -= (muA) * Grad_UARes[j, k, 1, 0] * Normals[j, k, 1];
break;
case 1:
acc += pARes[j, k] * Normals[j, k, 1];
acc -= (2 * muA) * Grad_UARes[j, k, 1, 1] * Normals[j, k, 1];
acc -= (muA) * Grad_UARes[j, k, 1, 0] * Normals[j, k, 0];
acc -= (muA) * Grad_UARes[j, k, 0, 1] * Normals[j, k, 0];
break;
default:
throw new NotImplementedException();
}
result[j, k] = acc;
}
}
}
else
{
for (int j = 0; j < Len; j++)
{
for (int k = 0; k < K; k++)
{
double acc = 0.0;
// pressure
switch (d)
{
case 0:
acc += pARes[j, k] * Normals[j, k, 0];
acc -= (2 * muA) * Grad_UARes[j, k, 0, 0] * Normals[j, k, 0];
acc -= (muA) * Grad_UARes[j, k, 0, 2] * Normals[j, k, 2];
acc -= (muA) * Grad_UARes[j, k, 0, 1] * Normals[j, k, 1];
acc -= (muA) * Grad_UARes[j, k, 1, 0] * Normals[j, k, 1];
acc -= (muA) * Grad_UARes[j, k, 2, 0] * Normals[j, k, 2];
break;
case 1:
acc += pARes[j, k] * Normals[j, k, 1];
acc -= (2 * muA) * Grad_UARes[j, k, 1, 1] * Normals[j, k, 1];
acc -= (muA) * Grad_UARes[j, k, 1, 2] * Normals[j, k, 2];
acc -= (muA) * Grad_UARes[j, k, 1, 0] * Normals[j, k, 0];
acc -= (muA) * Grad_UARes[j, k, 0, 1] * Normals[j, k, 0];
acc -= (muA) * Grad_UARes[j, k, 2, 1] * Normals[j, k, 2];
break;
case 2:
acc += pARes[j, k] * Normals[j, k, 2];
acc -= (2 * muA) * Grad_UARes[j, k, 2, 2] * Normals[j, k, 2];
acc -= (muA) * Grad_UARes[j, k, 2, 0] * Normals[j, k, 0];
acc -= (muA) * Grad_UARes[j, k, 2, 1] * Normals[j, k, 1];
acc -= (muA) * Grad_UARes[j, k, 0, 2] * Normals[j, k, 0];
acc -= (muA) * Grad_UARes[j, k, 1, 2] * Normals[j, k, 1];
break;
default:
throw new NotImplementedException();
}
result[j, k] = acc;
}
}
}
};
var SchemeHelper = LsTrk.GetXDGSpaceMetrics(new[] { LsTrk.GetSpeciesId("A") }, RequiredOrder, 1).XQuadSchemeHelper;
//var SchemeHelper = new XQuadSchemeHelper(LsTrk, momentFittingVariant, );
CellQuadratureScheme cqs = SchemeHelper.GetLevelSetquadScheme(0, LsTrk.Regions.GetCutCellMask());
CellQuadrature.GetQuadrature(new int[] { 1 }, LsTrk.GridDat,
cqs.Compile(LsTrk.GridDat, RequiredOrder), // agg.HMForder),
delegate(int i0, int Length, QuadRule QR, MultidimensionalArray EvalResult) {
ErrFunc(i0, Length, QR.Nodes, EvalResult.ExtractSubArrayShallow(-1, -1, 0));
},
delegate(int i0, int Length, MultidimensionalArray ResultsOfIntegration) {
for (int i = 0; i < Length; i++)
{
forces[d] += ResultsOfIntegration[i, 0];
}
}
).Execute();
}
for (int i = 0; i < D; i++)
{
forces[i] = MPI.Wrappers.MPIExtensions.MPISum(forces[i]);
}
return(forces);
}
/// <summary>
/// only for debugging and testing; converts the matrix to a full matrix;
/// when running in parallel, the matrix is collected on process 0.
/// </summary>
/// <returns>
/// null on all MPI processes, except on rank 0;
/// </returns>
static public MultidimensionalArray ToFullMatrixOnProc0(this IMutableMatrixEx tis)
{
var comm = tis.MPI_Comm;
int Rank = tis.RowPartitioning.MpiRank;
int Size = tis.RowPartitioning.MpiSize;
double[,] ret = null;
if (Rank == 0)
{
ret = new double[tis.NoOfRows, tis.NoOfCols];
}
SerialisationMessenger sms = new SerialisationMessenger(comm);
if (Rank > 0)
{
sms.SetCommPath(0);
}
sms.CommitCommPaths();
Tuple <int, int[], double[]>[] data;
{
int L = tis.RowPartitioning.LocalLength;
data = new Tuple <int, int[], double[]> [L];
int i0 = (int)tis.RowPartitioning.i0;
for (int i = 0; i < L; i++)
{
double[] val = null; // this mem. must be inside the loop/allocated for every i and cannot be reused because we need all rows later.
int[] col = null;
int Lr = tis.GetRow(i + i0, ref col, ref val);
data[i] = new Tuple <int, int[], double[]>(Lr, col, val);
}
}
if (Rank > 0)
{
sms.Transmit(0, data);
}
int rcvProc = 0;
if (Rank == 0)
{
do
{
int i0 = (int)tis.RowPartitioning.GetI0Offest(rcvProc);
if (data.Length != tis.RowPartitioning.GetLocalLength(rcvProc))
{
throw new ApplicationException("internal error");
}
for (int i = 0; i < data.Length; i++)
{
//foreach (MsrMatrix.MatrixEntry entry in data[i]) {
// if (entry.m_ColIndex >= 0)
// ret[i + i0, entry.m_ColIndex] = entry.Value;
//}
int Lr = data[i].Item1;
int[] col = data[i].Item2;
double[] val = data[i].Item3;
for (int lr = 0; lr < Lr; lr++)
{
ret[i + i0, col[lr]] = val[lr];
}
}
} while (sms.GetNext(out rcvProc, out data));
}
else
{
if (sms.GetNext(out rcvProc, out data))
{
throw new ApplicationException("internal error");
}
}
if (Rank == 0)
{
var _ret = MultidimensionalArray.Create(ret.GetLength(0), ret.GetLength(1));
for (int i = 0; i < _ret.NoOfRows; i++)
{
for (int j = 0; j < _ret.NoOfCols; j++)
{
_ret[i, j] = ret[i, j];
}
}
return(_ret);
}
else
{
return(null);
}
}
/// <summary>
/// multiplies an <see cref="BlockDiagonalMatrix"/> by an <see cref="MsrMatrix"/>
/// </summary>
public static MsrMatrix Multiply(BlockDiagonalMatrix left, MsrMatrix right)
{
using (new FuncTrace()) {
if (left.NoOfCols != right.NoOfRows)
{
throw new ArgumentException("matrix size mismatch");
}
int _N = left.NoOfRowsPerBlock; // left blocks: no. of rows
int _M = left.NoOfColsPerBlock; // left blocks: no. of columns = right blocks: no. of rows
int _L = _M; // right blocks: no. of columns. Hope that fits, otherwise inefficient
MsrMatrix result = new MsrMatrix(left.RowPartitioning, right.ColPartition);
MultidimensionalArray lBlock = MultidimensionalArray.Create(_N, _M);
//MsrMatrix.MSREntry[][] BlockRow = new MsrMatrix.MSREntry[_M][];
//List<int> OccupiedBlocks = new List<int>();
var OccupiedBlocks = new SortedDictionary <int, MultidimensionalArray>();
List <MultidimensionalArray> MatrixPool = new List <MultidimensionalArray>(); // avoid realloc
int poolCnt = 0;
MultidimensionalArray resBlock = MultidimensionalArray.Create(_N, _L);
// loop over all blocks ...
int NoBlks = left.m_RowPart.LocalLength / left.NoOfRowsPerBlock;
for (int iBlk = 0; iBlk < NoBlks; iBlk++)
{
// reset:
OccupiedBlocks.Clear();
poolCnt = 0;
foreach (var M in MatrixPool)
{
M.Clear();
}
// upper left corner of block
int i0 = iBlk * _N + (int)left.RowPartitioning.i0;
int j0 = (i0 / _N) * _M;
// load block
for (int n = 0; n < _N; n++)
{
for (int m = 0; m < _M; m++)
{
lBlock[n, m] = left.Blox[iBlk, n, m];
}
}
// read Msr rows
int Last_rBlkCol = int.MinValue;
MultidimensionalArray Block = null;
for (int m = 0; m < _N; m++)
{
var BlockRow = right.GetRowShallow(j0 + m);
foreach (var e in BlockRow)
{
if (e.m_ColIndex >= 0)
{
int rBlkCol = e.m_ColIndex / _L;
if (rBlkCol != Last_rBlkCol)
{
if (!OccupiedBlocks.TryGetValue(rBlkCol, out Block))
{
if (MatrixPool.Count <= poolCnt)
{
MatrixPool.Add(MultidimensionalArray.Create(_M, _L));
}
Block = MatrixPool[poolCnt];
OccupiedBlocks.Add(rBlkCol, Block);
poolCnt++;
}
Last_rBlkCol = rBlkCol;
}
int jj = e.m_ColIndex % _L;
Block[m, jj] = e.Value;
}
}
}
Block = null;
// execute multiplys
foreach (KeyValuePair <int, MultidimensionalArray> rBlock in OccupiedBlocks)
{
resBlock.GEMM(1.0, lBlock, rBlock.Value, 0.0);
// upper left edge of resBlock
int _i0 = i0;
int _j0 = rBlock.Key * _L;
// write block
for (int i = 0; i < _M; i++)
{
for (int j = 0; j < _L; j++)
{
result[i + _i0, j + _j0] = resBlock[i, j];
}
}
}
}
// return
return(result);
}
}
public void Update(MultiphaseCellAgglomerator Agglomerator)
{
using (new FuncTrace()) {
//if(!this.XDGBasis.IsSubBasis(mmf.MaxBasis))
// throw new ArgumentException();
var LsTrk = this.XDGBasis.Tracker;
var CCBit = LsTrk.Regions.GetCutCellMask().GetBitMask();
int N = this.DGBasis.Length;
int JAGG = base.AggGrid.iLogicalCells.NoOfLocalUpdatedCells;
UpdateSpeciesMapping(Agglomerator);
// mass matrix in the aggregate cell, before we orthonormalize:
var AggCellMMb4Ortho = MultidimensionalArray.Create(N, N);
for (int jagg = 0; jagg < JAGG; jagg++)
{
int NoOfSpc_jagg = this.NoOfSpecies[jagg];
int[] AggCell = base.AggGrid.iLogicalCells.AggregateCellToParts[jagg];
int K = AggCell.Length;
int[,] sim = this.SpeciesIndexMapping[jagg];
Debug.Assert((sim == null) || (sim.GetLength(0) == NoOfSpc_jagg));
Debug.Assert((sim == null) || (sim.GetLength(1) == K));
if (sim == null)
{
// nothing to do.
// +++++++++++++++++++++++++++++++++++++++++++++++
this.XCompositeBasis[jagg] = null;
}
else
{
// the cut-cell may require some special treatment
// +++++++++++++++++++++++++++++++++++++++++++++++
for (int iSpc_agg = 0; iSpc_agg < NoOfSpc_jagg; iSpc_agg++) // loop over all species in aggregate cell
{
bool emptyCell = false; // true: at least one of the base cells which form
// aggregate cell 'jagg' is empty with respect to the 'iSpc_agg'--th species.
// => this will alter the projection operator.
for (int k = 0; k < K; k++)
{
if (sim[iSpc_agg, k] < 0)
{
emptyCell = true;
break;
}
}
#if DEBUG
{
bool NonEmpty = false;
for (int k = 0; k < K; k++)
{
if (sim[iSpc_agg, k] >= 0)
{
NonEmpty = true;
break;
}
}
Debug.Assert(NonEmpty); // there should be at least one non-empty base cell (for species 'iSpc_agg')
// in aggregate cell 'jagg'
}
#endif
if (this.XCompositeBasis[jagg] == null || (this.XCompositeBasis[jagg].Length != NoOfSpc_jagg))
{
this.XCompositeBasis[jagg] = new MultidimensionalArray[NoOfSpc_jagg];
}
if (emptyCell)
{
// compute mass matrix in aggregate cell 'jagg' for species index 'iSpc_agg'
// -------------------------------------------------------------------------
AggCellMMb4Ortho.Clear();
for (int k = 0; k < K; k++) // loop over the base cells in the aggregate cell
{
if (sim[iSpc_agg, k] >= 0)
{
var ExPolMtx = base.CompositeBasis[jagg].ExtractSubArrayShallow(k, -1, -1);
AggCellMMb4Ortho.Multiply(1.0, ExPolMtx, ExPolMtx, 1.0, "lm", "im", "il");
}
}
// change to orthonormal basis
// ---------------------------
MultidimensionalArray B = MultidimensionalArray.Create(N, N);
AggCellMMb4Ortho.SymmetricLDLInversion(B, default(double[]));
if (this.XCompositeBasis[jagg][iSpc_agg] == null)
{
this.XCompositeBasis[jagg][iSpc_agg] = MultidimensionalArray.Create(K, N, N);
}
var X_ExPolMtx = this.XCompositeBasis[jagg][iSpc_agg];
var NonX_ExPolMtx = CompositeBasis[jagg];
X_ExPolMtx.Allocate(NonX_ExPolMtx.Lengths); // should not reallocate if lengths stay the same;
X_ExPolMtx.Multiply(1.0, NonX_ExPolMtx, B, 0.0, "imn", "imk", "kn");
}
else
{
// no empty cell with respect to species 'iSpc_agg' in aggregate cell
// --> non-XDG projector can be used.
// ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
this.XCompositeBasis[jagg][iSpc_agg] = null;
}
}
}
}
}
}
/// <summary>
///
/// </summary>
/// <param name="jCell">
/// Local index of cell which should be recalculated.
/// </param>
/// <param name="AcceptedMask">
/// Bitmask which marks accepted cells - if any neighbor of
/// <paramref name="jCell"/> is _accepted_, this defines a Dirichlet
/// boundary; otherwise, the respective cell face is a free boundary.
/// </param>
/// <param name="Phi">
/// Input and output:
/// - input for _accepted_ cells, i.e. Dirichlet boundary values
/// - input and output for <paramref name="jCell"/>: an initial value for the iterative procedure, resp. on exit the result of the iteration.
/// </param>
/// <param name="gradPhi">
/// Auxillary variable to store the gradient of the level-set-field.
/// </param>
/// <returns></returns>
public bool LocalSolve(int jCell, BitArray AcceptedMask, SinglePhaseField Phi, VectorField <SinglePhaseField> gradPhi)
{
Stpw_tot.Start();
int N = this.LevelSetBasis.GetLength(jCell);
int i0G = this.LevelSetMapping.GlobalUniqueCoordinateIndex(0, jCell, 0);
int i0L = this.LevelSetMapping.LocalUniqueCoordinateIndex(0, jCell, 0);
double penaltyBase = ((double)(this.LevelSetBasis.Degree + 2)).Pow2();
double CellVolume = this.GridDat.Cells.GetCellVolume(jCell);
int p = Phi.Basis.Degree;
// subgrid on which we are working, consisting only of one cell
SubGrid jCellGrid = new SubGrid(new CellMask(this.GridDat, Chunk.GetSingleElementChunk(jCell)));
var VolScheme = new CellQuadratureScheme(domain: jCellGrid.VolumeMask);
var EdgScheme = new EdgeQuadratureScheme(domain: jCellGrid.AllEdgesMask);
//var VolRule = VolScheme.SaveCompile(GridDat, 3 * p);
//var EdgRule = EdgScheme.SaveCompile(GridDat, 3 * p);
// parameter list for operator
DGField[] Params = new DGField[] { Phi };
gradPhi.ForEach(f => f.AddToArray(ref Params));
// build operator
var comp = new EllipticReinitForm(AcceptedMask, jCell, penaltyBase, this.GridDat.Cells.cj);
comp.LhsSwitch = 1.0; // matrix is constant -- Lhs Matrix only needs to be computed once
comp.RhsSwitch = -1.0; // Rhs must be updated in every iteration
var op = comp.Operator((DomDeg, ParamDeg, CodDeg) => 3 * p);
// iteration loop:
MultidimensionalArray Mtx = MultidimensionalArray.Create(N, N);
double[] Rhs = new double[N];
double ChangeNorm = 0;
int iIter;
for (iIter = 0; iIter < 100; iIter++)
{
// update gradient
gradPhi.Clear(jCellGrid.VolumeMask);
gradPhi.Gradient(1.0, Phi, jCellGrid.VolumeMask);
// assemble matrix and rhs
{
// clear
for (int n = 0; n < N; n++)
{
if (iIter == 0)
{
m_LaplaceMatrix.ClearRow(i0G + n);
}
this.m_LaplaceAffine[i0L + n] = 0;
}
// compute matrix (only in iteration 0) and rhs
if (iIter == 0)
{
Stpw_Mtx.Start();
}
Stpw_Rhs.Start();
op.ComputeMatrixEx(this.LevelSetMapping, Params, this.LevelSetMapping,
iIter == 0 ? this.m_LaplaceMatrix : null, this.m_LaplaceAffine,
OnlyAffine: iIter > 0,
volQuadScheme: VolScheme, edgeQuadScheme: EdgScheme,
//volRule: VolRule, edgeRule: EdgRule,
ParameterMPIExchange: false);
//op.Internal_ComputeMatrixEx(this.GridDat,
// this.LevelSetMapping, Params, this.LevelSetMapping,
// iIter == 0 ? this.m_LaplaceMatrix : default(MsrMatrix), this.m_LaplaceAffine, iIter > 0,
// 0.0,
// EdgRule, VolRule,
// null, false);
if (iIter == 0)
{
Stpw_Mtx.Stop();
}
Stpw_Rhs.Stop();
// extract matrix for 'jCell'
for (int n = 0; n < N; n++)
{
#if DEBUG
int Lr;
int[] row_cols = null;
double[] row_vals = null;
Lr = this.m_LaplaceMatrix.GetRow(i0G + n, ref row_cols, ref row_vals);
for (int lr = 0; lr < Lr; lr++)
{
int ColIndex = row_cols[lr];
double Value = row_vals[lr];
Debug.Assert((ColIndex >= i0G && ColIndex < i0G + N) || (Value == 0.0), "Matrix is expected to be block-diagonal.");
}
#endif
if (iIter == 0)
{
for (int m = 0; m < N; m++)
{
Mtx[n, m] = this.m_LaplaceMatrix[i0G + n, i0G + m];
}
}
else
{
#if DEBUG
for (int m = 0; m < N; m++)
{
Debug.Assert(Mtx[n, m] == this.m_LaplaceMatrix[i0G + n, i0G + m]);
}
#endif
}
Rhs[n] = -this.m_LaplaceAffine[i0L + n];
}
}
// solve
double[] sol = new double[N];
Mtx.Solve(sol, Rhs);
ChangeNorm = GenericBlas.L2Dist(sol, Phi.Coordinates.GetRow(jCell));
Phi.Coordinates.SetRow(jCell, sol);
if (ChangeNorm / CellVolume < 1.0e-10)
{
break;
}
}
//Console.WriteLine("Final change norm: {0}, \t iter: {1}", ChangeNorm, iIter );
if (ChangeNorm > 1.0e-6)
{
Console.WriteLine(" local solver funky in cell: " + jCell + ", last iteration change norm = " + ChangeNorm);
}
Stpw_tot.Stop();
return(true);
}
/// <summary>
/// Returns the minimum and the maximum value of <paramref name="mod"/>(this DG field), for each cell;
/// </summary>
/// <param name="max">
/// Vector, with the same number of entries as the cell mask <paramref name="cm"/>;
/// On exit, the approximate local maximum within the cell.
/// </param>
/// <param name="min">
/// Vector, with the same number of entries as the cell mask <paramref name="cm"/>;
/// On exit, the approximate local minimum within the cell.
/// </param>
/// <param name="cm">
/// optional domain restriction
/// </param>
/// <param name="mod">
/// optimal modifier, which e.g. may select the absolute value; if null, the identity function;
/// </param>
public void GetCellwiseExtremalValues <T1, T2>(T1 min, T2 max, CellMask cm = null, Func <double, double> mod = null)
where T1 : IList <double>
where T2 : IList <double> //
{
using (new FuncTrace()) {
int J = Basis.GridDat.iLogicalCells.NoOfLocalUpdatedCells;
int Jcm = cm == null ? J : cm.NoOfItemsLocally;
if (min.Count != Jcm)
{
throw new ArgumentException("wrong length of output vector", "min");
}
if (max.Count != Jcm)
{
throw new ArgumentException("wrong length of output vector", "max");
}
min.SetAll(double.MaxValue);
max.SetAll(double.MinValue);
if (mod == null)
{
mod = (x => x);
}
//int N = m_context.Grid.GridSimplex.NoOfVertices + 1;
// find maximum on this processor
// ------------------------------
// create node set
if (m_ExtremalProbeNS == null)
{
// nodes for the evaluation of the velocity vector
// (all vertices an 0)
int D = Basis.GridDat.SpatialDimension;
var KrefS = Basis.GridDat.iGeomCells.RefElements;
m_ExtremalProbeNS = new NodeSet[KrefS.Length];
for (int i = 0; i < KrefS.Length; i++)
{
m_ExtremalProbeNS[i] = new NodeSet(KrefS[i], KrefS[i].Vertices);
}
}
// vectorisation of this method
int VectorSize = -1;
int N0 = m_ExtremalProbeNS[0].NoOfNodes; // number of nodes
MultidimensionalArray fieldValues = new MultidimensionalArray(2);
IEnumerable <Chunk> all_chunks;
if (cm == null)
{
var _ch = new Chunk[1];
_ch[0].i0 = 0;
_ch[0].Len = J;
all_chunks = _ch;
}
else
{
all_chunks = cm;
}
int jSub = 0;
foreach (Chunk chk in all_chunks)
{
VectorSize = this.GridDat.iGeomCells.GetNoOfSimilarConsecutiveCells(CellInfo.RefElementIndex_Mask, chk.i0, Math.Min(100, chk.Len)); // try to be a little vectorized;
int _J = chk.Len + chk.i0;
for (int j0 = chk.i0; j0 < _J; j0 += VectorSize)
{
if (j0 + VectorSize > _J)
{
VectorSize = _J - j0;
}
int iKref = Basis.GridDat.iGeomCells.GetRefElementIndex(j0);
int N = m_ExtremalProbeNS[iKref].NoOfNodes;
if (fieldValues.GetLength(0) != VectorSize || fieldValues.GetLength(1) != N)
{
fieldValues = MultidimensionalArray.Create(VectorSize, N);
}
this.Evaluate(j0, VectorSize, m_ExtremalProbeNS[iKref], fieldValues, 0.0);
// loop over cells ...
for (int jCell = j0; jCell < j0 + VectorSize; jCell++)
{
// loop over nodes ...
for (int n = 0; n < N; n++)
{
double vel = 0;
vel = mod(fieldValues[jCell - j0, n]);
min[jSub] = Math.Min(min[jSub], vel);
max[jSub] = Math.Max(max[jSub], vel);
}
jSub++;
}
}
}
}
}
public override void ProlongateToFullGrid <T, V>(T FullGridVector, V AggGridVector)
{
var fullMapping = new UnsetteledCoordinateMapping(this.XDGBasis);
if (FullGridVector.Count != fullMapping.LocalLength)
{
throw new ArgumentException("mismatch in vector length", "FullGridVector");
}
int L = this.LocalDim;
if (AggGridVector.Count != L)
{
throw new ArgumentException("mismatch in vector length", "AggGridVector");
}
var ag = this.AggGrid;
var agCls = ag.iLogicalCells.AggregateCellToParts;
int JAGG = ag.iLogicalCells.NoOfLocalUpdatedCells;
int Nmax = this.XDGBasis.MaximalLength;
int N = this.DGBasis.Length;
Debug.Assert(Nmax % N == 0);
var FulCoords = new double[N];
var AggCoords = new double[N];
for (int jAgg = 0; jAgg < JAGG; jAgg++) // loop over all composite cells...
{
int[] agCl = agCls[jAgg];
int K = agCl.Length;
if (this.SpeciesIndexMapping[jAgg] == null)
{
Debug.Assert(this.XCompositeBasis[jAgg] == null);
int i0 = jAgg * Nmax; // index offset into 'AggGridVector'
for (int n = 0; n < N; n++)
{
AggCoords[n] = AggGridVector[n + i0];
}
for (int k = 0; k < K; k++) // loop over the cells wich form the aggregated cell...
{
int jCell = agCl[k];
int j0 = fullMapping.LocalUniqueCoordinateIndex(0, jCell, 0);
MultidimensionalArray Trf = base.CompositeBasis[jAgg].ExtractSubArrayShallow(k, -1, -1);
//Trf.Solve(FulCoords, AggCoords);
Trf.GEMV(1.0, AggCoords, 0.0, FulCoords);
for (int n = 0; n < N; n++)
{
FullGridVector[j0 + n] = FulCoords[n];
}
}
}
else
{
int NoSpc = this.NoOfSpecies[jAgg];
int[,] sim = SpeciesIndexMapping[jAgg];
Debug.Assert(sim.GetLength(0) == NoSpc);
Debug.Assert(sim.GetLength(1) == K);
for (int iSpcAgg = 0; iSpcAgg < NoSpc; iSpcAgg++)
{
int i0 = jAgg * Nmax + iSpcAgg * N; // index offset into 'AggGridVector'
for (int n = 0; n < N; n++)
{
AggCoords[n] = AggGridVector[n + i0];
}
for (int k = 0; k < K; k++) // loop over the cells wich form the aggregated cell...
{
int jCell = agCl[k];
int iSpcBase = sim[iSpcAgg, k];
if (iSpcBase < 0)
{
continue;
}
int j0 = fullMapping.LocalUniqueCoordinateIndex(0, jCell, iSpcBase * N);
MultidimensionalArray Trf;
if (this.XCompositeBasis[jAgg] == null || this.XCompositeBasis[jAgg][iSpcAgg] == null)
{
Trf = base.CompositeBasis[jAgg].ExtractSubArrayShallow(k, -1, -1);
}
else
{
Trf = this.XCompositeBasis[jAgg][iSpcAgg].ExtractSubArrayShallow(k, -1, -1);
}
Trf.GEMV(1.0, AggCoords, 0.0, FulCoords);
for (int n = 0; n < N; n++)
{
FullGridVector[j0 + n] = FulCoords[n];
}
}
}
}
}
}
void INonlinEdgeform_GradV.BoundaryEdge(ref EdgeFormParams efp, MultidimensionalArray[] Uin, MultidimensionalArray[] GradUin, MultidimensionalArray f)
{
int L = efp.Len;
Debug.Assert(f.GetLength(0) == L);
int K = f.GetLength(1); // no of nodes per cell
int D = efp.GridDat.SpatialDimension;
int _NOParams = this.ParameterOrdering == null ? 0 : this.ParameterOrdering.Count;
Debug.Assert(_NOParams == efp.ParameterVars_IN.Length);
int _NOargs = this.ArgumentOrdering.Count;
Debug.Assert(_NOargs == Uin.Length);
Debug.Assert(_NOargs == GradUin.Length);
CommonParamsBnd cpv;
cpv.GridDat = efp.GridDat;
cpv.Parameters_IN = new double[_NOParams];
cpv.Normale = new double[D];
cpv.X = new double[D];
cpv.time = efp.time;
double[] _GradV_in = new double[D];
double[,] _GradU_in = new double[_NOargs, D];
double[] _U_in = new double[_NOargs];
double _V_in = 0.0;
byte[] EdgeTags = efp.GridDat.iGeomEdges.EdgeTags;
for (int l = 0; l < L; l++) // loop over cells...
{
cpv.iEdge = efp.e0 + l;
cpv.EdgeTag = EdgeTags[cpv.iEdge];
for (int k = 0; k < K; k++) // loop over nodes...
{
for (int np = 0; np < _NOParams; np++)
{
cpv.Parameters_IN[np] = efp.ParameterVars_IN[np][l, k];
}
for (int d = 0; d < D; d++)
{
cpv.Normale[d] = efp.Normals[l, k, d];
cpv.X[d] = efp.NodesGlobal[l, k, d];
}
for (int na = 0; na < _NOargs; na++)
{
if (Uin[na] != null)
{
_U_in[na] = Uin[na][l, k];
}
else
{
_U_in[na] = 0;
}
if (GradUin[na] != null)
{
for (int d = 0; d < D; d++)
{
_GradU_in[na, d] = GradUin[na][l, k, d];
}
}
else
{
for (int d = 0; d < D; d++)
{
_GradU_in[na, d] = 0;
}
}
}
for (int d = 0; d < D; d++)
{
_GradV_in[d] = 1;
f[l, k, d] += edgeForm.BoundaryEdgeForm(ref cpv, _U_in, _GradU_in, _V_in, _GradV_in);
_GradV_in[d] = 0;
}
}
}
}
void INonlinVolumeForm_V.Form(ref VolumFormParams prm, MultidimensionalArray[] U, MultidimensionalArray[] GradU, MultidimensionalArray f)
{
int L = prm.Len;
Debug.Assert(f.GetLength(0) == L);
int K = f.GetLength(1); // no of nodes per cell
int D = prm.GridDat.SpatialDimension;
int _NOParams = this.ParameterOrdering == null ? 0 : this.ParameterOrdering.Count;
Debug.Assert(_NOParams == prm.ParameterVars.Length);
int _NOargs = this.ArgumentOrdering.Count;
Debug.Assert(_NOargs == U.Length);
Debug.Assert(_NOargs == GradU.Length);
CommonParamsVol cpv;
cpv.GridDat = prm.GridDat;
cpv.Parameters = new double[_NOParams];
cpv.Xglobal = new double[D];
cpv.time = prm.time;
double[] _GradV = new double[D];
double[,] _GradU = new double[_NOargs, D];
double[] _U = new double[_NOargs];
double _V = 1.0;
for (int l = 0; l < L; l++) // loop over cells...
{
cpv.jCell = prm.j0 + l;
for (int k = 0; k < K; k++) // loop over nodes...
{
for (int np = 0; np < _NOParams; np++)
{
cpv.Parameters[np] = prm.ParameterVars[np][l, k];
}
for (int d = 0; d < D; d++)
{
cpv.Xglobal[d] = prm.Xglobal[l, k, d];
}
for (int na = 0; na < _NOargs; na++)
{
if (U[na] != null)
{
_U[na] = U[na][l, k];
}
if (GradU[na] != null)
{
for (int d = 0; d < D; d++)
{
_GradU[na, d] = GradU[na][l, k, d];
}
}
}
f[l, k] += volForm.VolumeForm(ref cpv, _U, _GradU, _V, _GradV);
}
}
}
void INonlinVolumeForm_GradV.Form(ref VolumFormParams prm, MultidimensionalArray[] U, MultidimensionalArray[] GradU, MultidimensionalArray f)
{
int L = prm.Len;
Debug.Assert(f.GetLength(0) == L);
int K = f.GetLength(1); // no of nodes per cell
int D = prm.GridDat.SpatialDimension;
int _NOParams = this.ParameterOrdering == null ? 0 : this.ParameterOrdering.Count;
Debug.Assert(_NOParams == prm.ParameterVars.Length);
int _NOargs = this.ArgumentOrdering.Count;
Debug.Assert(_NOargs == U.Length);
Debug.Assert(_NOargs == GradU.Length);
CommonParamsVol cpv;
cpv.GridDat = prm.GridDat;
cpv.Parameters = new double[_NOParams];
cpv.Xglobal = new double[D];
cpv.time = prm.time;
double[] _GradV = new double[D];
double[,] _GradU = new double[_NOargs, D];
double[] _U = new double[_NOargs];
double _V = 0.0;
//unsafe {
// fixed(double* pParameters = cpv.Parameters, p_U = _U, p_GradU = _GradU, p_GradV = _GradV) {
//bool* pUisNull = stackalloc bool[_NOargs];
//bool* pGradUisNull = stackalloc bool[_NOargs];
//for(int na = 0; na < _NOargs; na++) {
// pUisNull[na] = (U[na] != null);
// pGradUisNull[na] = (GradU[na] != null);
//}
// unsafe opt bringt hier relativ wenig/nix
for (int l = 0; l < L; l++) // loop over cells...
{
cpv.jCell = prm.j0 + l;
for (int k = 0; k < K; k++) // loop over nodes...
{
for (int d = 0; d < D; d++)
{
cpv.Xglobal[d] = prm.Xglobal[l, k, d];
}
for (int np = 0; np < _NOParams; np++)
{
cpv.Parameters[np] = prm.ParameterVars[np][l, k];
}
/*
* bool* ppUisNull = pUisNull;
* bool* ppGradUisNull = pGradUisNull;
* double* pp_U = p_U, pp_GradU = p_GradU;
* for(int na = 0; na < _NOargs; na++) {
* if(*ppUisNull) {
* pp_U = U[na][l, k];
* } else {
* pp_U = double.NaN;
* }
* pp_U++;
* if(*ppGradUisNull) {
* for(int d = 0; d < D; d++) {
* pp_GradU = GradU[na][l, k, d];
* pp_GradU++;
* }
* } else {
* for(int d = 0; d < D; d++) {
* pp_GradU = double.NaN;
* pp_GradU++;
* }
* }
* ppUisNull++;
* ppGradUisNull++;
* }
*/
for (int na = 0; na < _NOargs; na++)
{
if (U[na] != null)
{
_U[na] = U[na][l, k];
}
else
{
_U[na] = double.NaN;
}
if (GradU[na] != null)
{
for (int d = 0; d < D; d++)
{
_GradU[na, d] = GradU[na][l, k, d];
}
}
else
{
for (int d = 0; d < D; d++)
{
_GradU[na, d] = double.NaN;
}
}
}
/*
* double* pp_GradV = p_GradV;
* for(int d = 0; d < D; d++) {
* pp_GradV = 1.0;
* f[l, k, d] += volForm.VolumeForm(ref cpv, _U, _GradU, _V, _GradV);
* pp_GradV = 0.0;
* pp_GradV++;
* }
*/
for (int d = 0; d < D; d++)
{
_GradV[d] = 1.0;
f[l, k, d] += volForm.VolumeForm(ref cpv, _U, _GradU, _V, _GradV);
_GradV[d] = 0.0;
}
}
}
}
void INonlinEdgeform_GradV.InternalEdge(ref EdgeFormParams efp, MultidimensionalArray[] Uin, MultidimensionalArray[] Uout, MultidimensionalArray[] GradUin, MultidimensionalArray[] GradUout,
MultidimensionalArray fin, MultidimensionalArray fot, bool adiaWall)
{
int L = efp.Len;
Debug.Assert(fin.GetLength(0) == L);
Debug.Assert(fot.GetLength(0) == L);
int K = fin.GetLength(1); // no of nodes per cell
int D = efp.GridDat.SpatialDimension;
int _NOParams = this.ParameterOrdering == null ? 0 : this.ParameterOrdering.Count;
Debug.Assert(_NOParams == efp.ParameterVars_IN.Length);
Debug.Assert(_NOParams == efp.ParameterVars_OUT.Length);
int _NOargs = this.ArgumentOrdering.Count;
Debug.Assert(_NOargs == Uin.Length);
Debug.Assert(_NOargs == GradUin.Length);
Debug.Assert(_NOargs == Uout.Length);
Debug.Assert(_NOargs == GradUout.Length);
CommonParams cpv;
cpv.GridDat = efp.GridDat;
cpv.Parameters_IN = new double[_NOParams];
cpv.Parameters_OUT = new double[_NOParams];
cpv.Normale = new double[D];
cpv.X = new double[D];
cpv.time = efp.time;
double[] _GradV_in = new double[D];
double[,] _GradU_in = new double[_NOargs, D];
double[] _U_in = new double[_NOargs];
double _V_in = 0.0;
double[] _GradV_ot = new double[D];
double[,] _GradU_ot = new double[_NOargs, D];
double[] _U_ot = new double[_NOargs];
double _V_ot = 0.0;
for (int l = 0; l < L; l++) // loop over cells...
{
cpv.iEdge = efp.e0 + l;
for (int k = 0; k < K; k++) // loop over nodes...
{
for (int np = 0; np < _NOParams; np++)
{
cpv.Parameters_IN[np] = efp.ParameterVars_IN[np][l, k];
cpv.Parameters_OUT[np] = efp.ParameterVars_OUT[np][l, k];
}
for (int d = 0; d < D; d++)
{
cpv.Normale[d] = efp.Normals[l, k, d];
cpv.X[d] = efp.NodesGlobal[l, k, d];
}
for (int na = 0; na < _NOargs; na++)
{
Debug.Assert((Uin[na] != null) == (Uout[na] != null));
if (Uin[na] != null)
{
_U_in[na] = Uin[na][l, k];
_U_ot[na] = Uout[na][l, k];
}
else
{
_U_in[na] = 0;
_U_ot[na] = 0;
}
Debug.Assert((GradUin[na] != null) == (GradUout[na] != null));
if (GradUin[na] != null)
{
for (int d = 0; d < D; d++)
{
_GradU_in[na, d] = GradUin[na][l, k, d];
_GradU_ot[na, d] = GradUout[na][l, k, d];
}
}
else
{
for (int d = 0; d < D; d++)
{
_GradU_in[na, d] = 0;
_GradU_ot[na, d] = 0;
}
}
}
for (int d = 0; d < D; d++)
{
_GradV_in[d] = 1;
fin[l, k, d] += edgeForm.InnerEdgeForm(ref cpv, _U_in, _U_ot, _GradU_in, _GradU_ot, _V_in, _V_ot, _GradV_in, _GradV_ot);
_GradV_in[d] = 0;
_GradV_ot[d] = 1;
fot[l, k, d] += edgeForm.InnerEdgeForm(ref cpv, _U_in, _U_ot, _GradU_in, _GradU_ot, _V_in, _V_ot, _GradV_in, _GradV_ot);
_GradV_ot[d] = 0;
}
}
}
}
/// <summary>
/// Spatial operator matrix analysis method
/// </summary>
public void SpatialOperatorMatrixAnalysis(bool CheckAssertions, int AnalysisLevel)
{
using (var solver = new Rheology()) {
int D = solver.Grid.SpatialDimension;
if (AnalysisLevel < 0 || AnalysisLevel > 2)
{
throw new ArgumentException();
}
BlockMsrMatrix OpMatrix;
double[] OpAffine;
solver.AssembleMatrix(out OpMatrix, out OpAffine, solver.CurrentSolution.Mapping.ToArray(), true);
// =============================
// AnalysisLevel 0
// =============================
{
var OpMatrixT = OpMatrix.Transpose();
CoordinateVector TestVec = new CoordinateVector(solver.CurrentSolution.Mapping.Fields.Select(f => f.CloneAs()).ToArray());
double testsumPos = 0.0;
double testsumNeg = 0.0;
for (int rnd_seed = 0; rnd_seed < 20; rnd_seed++)
{
// fill the pressure components of the test vector
TestVec.Clear();
Random rnd = new Random(rnd_seed);
DGField Pressack = TestVec.Mapping.Fields[D] as DGField;
int J = solver.GridData.iLogicalCells.NoOfLocalUpdatedCells;
for (int j = 0; j < J; j++)
{
int N = Pressack.Basis.GetLength(j);
for (int n = 0; n < N; n++)
{
Pressack.Coordinates[j, n] = rnd.NextDouble();
}
}
// Gradient times P:
double[] R1 = new double[TestVec.Count];
OpMatrix.SpMV(1.0, TestVec, 0.0, R1); // R1 = Grad * P
//Console.WriteLine("L2 of 'Grad * P': " + R1.L2Norm());
// transpose of Divergence times P:
double[] R2 = new double[TestVec.Count];
OpMatrix.SpMV(1.0, TestVec, 0.0, R2); // R2 = divT * P
//Console.WriteLine("L2 of 'divT * P': " + R2.L2Norm());
TestVec.Clear();
TestVec.Acc(1.0, R1);
TestVec.Acc(1.0, R2);
// analyze!
testsumNeg += GenericBlas.L2Dist(R1, R2);
R2.ScaleV(-1.0);
testsumPos += GenericBlas.L2Dist(R1, R2);
}
Console.WriteLine("Pressure/Divergence Symmetry error in all tests (+): " + testsumPos);
Console.WriteLine("Pressure/Divergence Symmetry error in all tests (-): " + testsumNeg);
if (CheckAssertions)
{
Assert.LessOrEqual(Math.Abs(testsumNeg), testsumPos * 1.0e-13);
}
}
// =============================
// AnalysisLevel 1 and 2
// =============================
if (AnalysisLevel > 0)
{
AggregationGridBasis[][] MgBasis = AggregationGridBasis.CreateSequence(solver.MultigridSequence, solver.CurrentSolution.Mapping.BasisS);
MultigridOperator mgOp = new MultigridOperator(MgBasis, solver.CurrentSolution.Mapping, OpMatrix, null, solver.MultigridOperatorConfig);
// extract
////////////
MsrMatrix FullMatrix = mgOp.OperatorMatrix.ToMsrMatrix();
MsrMatrix DiffMatrix;
{
int[] VelVarIdx = D.ForLoop(d => d);
int[] USubMatrixIdx_Row = mgOp.Mapping.GetSubvectorIndices(VelVarIdx);
int[] USubMatrixIdx_Col = mgOp.Mapping.GetSubvectorIndices(VelVarIdx);
int L = USubMatrixIdx_Row.Length;
DiffMatrix = new MsrMatrix(L, L, 1, 1);
FullMatrix.WriteSubMatrixTo(DiffMatrix, USubMatrixIdx_Row, default(int[]), USubMatrixIdx_Col, default(int[]));
double DiffMatrix_sd = DiffMatrix.SymmetryDeviation();
Console.WriteLine("Diffusion assymetry:" + DiffMatrix_sd);
}
MsrMatrix SaddlePointMatrix;
{
int[] VelPVarIdx = new int[] { 0, 1, 2 };
int[] VelPSubMatrixIdx_Row = mgOp.Mapping.GetSubvectorIndices(VelPVarIdx);
int[] VelPSubMatrixIdx_Col = mgOp.Mapping.GetSubvectorIndices(VelPVarIdx);
int L = VelPSubMatrixIdx_Row.Length;
SaddlePointMatrix = new MsrMatrix(L, L, 1, 1);
FullMatrix.WriteSubMatrixTo(SaddlePointMatrix, VelPSubMatrixIdx_Row, default(int[]), VelPSubMatrixIdx_Col, default(int[]));
}
//SaddlePointMatrix.SaveToTextFileSparse("C:\\Users\\kikker\\Documents\\MATLAB\\spm.txt");
MsrMatrix ConstitutiveMatrix;
{
int[] StressVarIdx = new int[] { 3, 4, 5 };
int[] StressSubMatrixIdx_Row = mgOp.Mapping.GetSubvectorIndices(StressVarIdx);
int[] StressSubMatrixIdx_Col = mgOp.Mapping.GetSubvectorIndices(StressVarIdx);
int L = StressSubMatrixIdx_Row.Length;
ConstitutiveMatrix = new MsrMatrix(L, L, 1, 1);
FullMatrix.WriteSubMatrixTo(ConstitutiveMatrix, StressSubMatrixIdx_Row, default(int[]), StressSubMatrixIdx_Col, default(int[]));
}
// operator analysis
//////////////////////
bool posDef;
if (AnalysisLevel > 1)
{
// +++++++++++++++++++++++++++++++
// check condition number, etc
// +++++++++++++++++++++++++++++++
MultidimensionalArray ret = MultidimensionalArray.Create(1, 5);
Console.WriteLine("Calling MATLAB/Octave...");
using (BatchmodeConnector bmc = new BatchmodeConnector()) {
bmc.PutSparseMatrix(FullMatrix, "FullMatrix");
bmc.PutSparseMatrix(SaddlePointMatrix, "SaddlePointMatrix");
bmc.PutSparseMatrix(ConstitutiveMatrix, "ConstitutiveMatrix");
bmc.PutSparseMatrix(DiffMatrix, "DiffMatrix");
bmc.Cmd("DiffMatrix = 0.5*(DiffMatrix + DiffMatrix');");
bmc.Cmd("condNoFullMatrix = condest(FullMatrix);");
bmc.Cmd("condNoSaddlePointMatrix = condest(SaddlePointMatrix);");
bmc.Cmd("condNoConstitutiveMatrix = condest(ConstitutiveMatrix);");
bmc.Cmd("condNoDiffMatrix = condest(DiffMatrix);");
//bmc.Cmd("eigiMaxiSaddle = 1.0; % eigs(SaddlePointMatrix,1,'lm')");
//bmc.Cmd("eigiMiniSaddle = 1.0; % eigs(SaddlePointMatrix,1,'sm')");
//bmc.Cmd("eigiMaxiConst = 1.0; % eigs(ConstitutiveMatrix,1,'lm')");
//bmc.Cmd("eigiMiniConst = 1.0; % eigs(ConstitutiveMatrix,1,'sm')");
//bmc.Cmd("eigiMaxiDiff = 1.0; % eigs(DiffMatrix,1,'lm')");
//bmc.Cmd("eigiMiniDiff = 1.0; % eigs(DiffMatrix,1,'sm')");
bmc.Cmd("lasterr");
bmc.Cmd("[V,r]=chol(SaddlePointMatrix);");
bmc.Cmd("[V,r]=chol(ConstitutiveMatrix);");
bmc.Cmd("ret = [condNoFullMatrix, condNoSaddlePointMatrix, condNoConstitutiveMatrix, condNoDiffMatrix, r]"); //eigiMaxiSaddle, eigiMiniSaddle, eigiMaxiConst, eigiMiniConst, eigiMaxiDiff, eigiMiniDiff,
bmc.GetMatrix(ret, "ret");
bmc.Execute(false);
}
double condNoFullMatrix = ret[0, 0];
double condNoSaddlePMatrix = ret[0, 1];
double condNoConstitutiveMatrix = ret[0, 2];
double condNoDiffMatrix = ret[0, 3];
//double eigiMaxiSaddle = ret[0, 4];
//double eigiMiniSaddle = ret[0, 5];
//double eigiMaxiConst = ret[0, 6];
//double eigiMiniConst = ret[0, 7];
//double eigiMaxiDiff = ret[0, 8];
//double eigiMiniDiff = ret[0, 9];
posDef = ret[0, 4] == 0;
//Console.WriteLine("Eigenvalue range of saddle point matrix: {0} to {1}", eigiMiniSaddle, eigiMaxiSaddle);
//Console.WriteLine("Eigenvalue range of constitutive matrix: {0} to {1}", eigiMiniConst, eigiMaxiConst);
//Console.WriteLine("Eigenvalue range of diffusion matrix: {0} to {1}", eigiMiniDiff, eigiMaxiDiff);
Console.WriteLine("Condition number full operator: {0:0.####E-00}", condNoFullMatrix);
Console.WriteLine("Condition number saddle point operator: {0:0.####E-00}", condNoSaddlePMatrix);
Console.WriteLine("Condition number constitutive operator: {0:0.####E-00}", condNoConstitutiveMatrix);
Console.WriteLine("Condition number diffusion operator: {0:0.####E-00}", condNoDiffMatrix);
//base.QueryHandler.ValueQuery("ConditionNumber", condNoFullMatrix);
}
else
{
// +++++++++++++++++++++++++++++++++++++++
// test only for positive definiteness
// +++++++++++++++++++++++++++++++++++++++
var SaddlePMatrixFull = SaddlePointMatrix.ToFullMatrixOnProc0();
var ConstMatrixFull = ConstitutiveMatrix.ToFullMatrixOnProc0();
posDef = true;
try {
SaddlePMatrixFull.Cholesky();
} catch (ArithmeticException) {
posDef = false;
}
posDef = true;
try {
ConstMatrixFull.Cholesky();
} catch (ArithmeticException) {
posDef = false;
}
}
double SaddlePSymm = SaddlePointMatrix.SymmetryDeviation();
Console.WriteLine("Symmetry deviation of saddle point matrix: " + SaddlePSymm);
if (posDef)
{
Console.WriteLine("Good news: Saddle point operator matrix seems to be positive definite.");
}
else
{
Console.WriteLine("WARNING: Saddle point operator matrix is not positive definite.");
}
double ConstSymm = ConstitutiveMatrix.SymmetryDeviation();
Console.WriteLine("Symmetry deviation of constitutive matrix: " + ConstSymm);
if (posDef)
{
Console.WriteLine("Good news: constitutive operator matrix seems to be positive definite.");
}
else
{
Console.WriteLine("WARNING: constitutive operator matrix is not positive definite.");
}
//if (CheckAssertions) {
// if (Control.AdvancedDiscretizationOptions.ViscosityMode == ViscosityMode.FullySymmetric && Control.PhysicalParameters.IncludeConvection == false) {
// Assert.IsTrue(posDef, "Positive definiteness test failed.");
// double compVal = DiffMatrix.InfNorm() * 1e-13;
// Assert.LessOrEqual(DiffSymm, compVal, "Diffusion matrix seems to be non-symmetric.");
// }
//}
}
}
}
public void Solve <U, V>(U X, V B)
where U : IList <double>
where V : IList <double> //
{
int L = B.Count;
if (X.Count != this.m_mgop.OperatorMatrix.ColPartition.LocalLength)
{
throw new ArgumentException("Wrong length of unknowns vector.", "X");
}
if (B.Count != this.m_mgop.OperatorMatrix.RowPartitioning.LocalLength)
{
throw new ArgumentException("Wrong length of RHS vector.", "B");
}
MultidimensionalArray H = MultidimensionalArray.Create(MaxKrylovDim + 1, MaxKrylovDim);
double[] X0 = X.ToArray();
double[] R0 = new double[B.Count];
List <double[]> Vau = new List <double[]>();
List <double[]> Zed = new List <double[]>();
int iPrecond = 0; // counter which iterates through preconditioners
int iIter = 0;
while (true)
{
// init for Arnoldi
// -----------------
R0.SetV(B);
this.m_mgop.OperatorMatrix.SpMV(-1.0, X0, 1.0, R0);
if (this.IterationCallback != null)
{
this.IterationCallback(iIter, X0.CloneAs(), R0.CloneAs(), this.m_mgop);
}
// termination condition
if (iIter > MaxIter)
{
break;
}
double beta = R0.L2NormPow2().MPISum().Sqrt();
Vau.Add(R0.CloneAs());
Vau[0].ScaleV(1.0 / beta);
// inner iteration (Arnoldi)
// --------------------------
for (int j = 0; j < MaxKrylovDim; j++)
{
Debug.Assert(Vau.Count == Zed.Count + 1);
double[] Zj = new double[L];
this.PrecondS[iPrecond].Solve(Zj, Vau[j]);
iPrecond++;
if (iPrecond >= this.PrecondS.Length)
{
iPrecond = 0;
}
iIter++; // we count preconditioner calls as iterations
Zed.Add(Zj);
double[] W = new double[L];
this.m_mgop.OperatorMatrix.SpMV(1.0, Zj, 0.0, W);
for (int i = 0; i <= j; i++)
{
double hij = GenericBlas.InnerProd(W, Vau[i]).MPISum();
H[i, j] = hij;
W.AccV(-hij, Vau[i]);
}
double wNorm = W.L2NormPow2().MPISum().Sqrt();
H[j + 1, j] = wNorm;
W.ScaleV(1.0 / wNorm); // W is now Vau[j + 1] !!
Vau.Add(W);
Debug.Assert(Vau.Count == Zed.Count + 1);
}
// compute minimized-Residual solution over 'Zed'-Vectors
// -------------------------------------------------------
double[] alpha;
{
alpha = new double[MaxKrylovDim];
//var alpha2 = new double[MaxKrylovDim];
Debug.Assert(Vau.Count == H.NoOfRows);
Debug.Assert(Zed.Count == H.NoOfCols);
// solve small minimization problem
double[] minimiRHS = new double[MaxKrylovDim + 1];
minimiRHS[0] = beta;
H.LeastSquareSolve(alpha, minimiRHS); // using LAPACK DGELSY
//H.CloneAs().LeastSquareSolve(alpha2, minimiRHS.CloneAs());
//var Q = H; //
//var Qt = H.Transpose();
//var lhs = Qt.GEMM(Q);
//var rhs = new double[Qt.NoOfRows];
//Qt.gemv(1.0, minimiRHS, 0.0, rhs);
//lhs.Solve(alpha, rhs);
alpha.ClearEntries();
alpha[0] = beta;
}
for (int i = 0; i < MaxKrylovDim; i++)
{
X0.AccV(alpha[i], Zed[i]);
}
// now, X0 = 'old X0' + sum(Z[i]*alpha[i]),
// i.e. X0 is the new X for the next iteration
// restart
// -------
Vau.Clear();
Zed.Clear();
H.Clear();
}
}
/// <summary>
/// Calculates the drag (x-component) and lift (y-component) forces acting on a wall of a boundary fitted grid
/// </summary>
static public double[] GetForces_BoundaryFitted(VectorField <SinglePhaseField> GradU, VectorField <SinglePhaseField> GradV, SinglePhaseField StressXX,
SinglePhaseField StressXY, SinglePhaseField StressYY, SinglePhaseField P, LevelSetTracker LsTrk, double muA, double beta)
{
int D = LsTrk.GridDat.SpatialDimension;
if (D > 2)
{
throw new ArgumentException("Method GetForces_BoundaryFitted only implemented for 2D (viscoelastic)!");
}
// var UA = U.Select(u => u.GetSpeciesShadowField("A")).ToArray();
//var UA = U.ToArray();
MultidimensionalArray Grad_U = new MultidimensionalArray(D);
var _GradU = GradU.ToArray();
var _GradV = GradV.ToArray();
int RequiredOrder = _GradU[0].Basis.Degree * 3 + 2;
//int RequiredOrder = U[0].Basis.Degree * 3 + 2;
//int RequiredOrder = LsTrk.GetXQuadFactoryHelper(momentFittingVariant).GetCachedSurfaceOrders(0).Max();
//Console.WriteLine("Order reduction: {0} -> {1}", _RequiredOrder, RequiredOrder);
//if (RequiredOrder > agg.HMForder)
// throw new ArgumentException();
Console.WriteLine();
Console.WriteLine("Forces coeff: {0}, order = {1}", LsTrk.CutCellQuadratureType, RequiredOrder);
SinglePhaseField _StressXX = StressXX;
SinglePhaseField _StressXY = StressXY;
SinglePhaseField _StressYY = StressYY;
SinglePhaseField pA = null;
//pA = P.GetSpeciesShadowField("A");
pA = P;
double[] forces = new double[D];
for (int d = 0; d < D; d++)
{
ScalarFunctionEx ErrFunc = delegate(int j0, int Len, NodeSet Ns, MultidimensionalArray result) {
int K = result.GetLength(1); // No nof Nodes
MultidimensionalArray Grad_URes = MultidimensionalArray.Create(Len, K, D);
MultidimensionalArray Grad_VRes = MultidimensionalArray.Create(Len, K, D);
MultidimensionalArray pARes = MultidimensionalArray.Create(Len, K);
MultidimensionalArray StressXXRes = MultidimensionalArray.Create(Len, K);
MultidimensionalArray StressXYRes = MultidimensionalArray.Create(Len, K);
MultidimensionalArray StressYYRes = MultidimensionalArray.Create(Len, K);
var Normals = LsTrk.GridDat.Edges.NormalsCache.GetNormals_Edge(Ns, j0, Len);
//var Normals = MultidimensionalArray.Create(1, Ns.Length, 1);
//var Normals = LsTrk.GridDat.Edges.NormalsForAffine;
for (int i = 0; i < D; i++)
{
_GradU[i].EvaluateEdge(j0, Len, Ns, Grad_URes.ExtractSubArrayShallow(-1, -1, i),
Grad_URes.ExtractSubArrayShallow(-1, -1, i), ResultIndexOffset: 0, ResultPreScale: 1);
_GradV[i].EvaluateEdge(j0, Len, Ns, Grad_VRes.ExtractSubArrayShallow(-1, -1, i),
Grad_VRes.ExtractSubArrayShallow(-1, -1, i), ResultIndexOffset: 0, ResultPreScale: 1);
//UA[i].EvaluateGradient(j0, Len, Ns, Grad_UARes.ExtractSubArrayShallow(-1, -1, i, -1), 0, 1);
}
//pA.Evaluate(j0, Len, Ns, pARes);
pA.EvaluateEdge(j0, Len, Ns, pARes, pARes, ResultIndexOffset: 0, ResultPreScale: 1);
_StressXX.EvaluateEdge(j0, Len, Ns, StressXXRes, StressXXRes, ResultIndexOffset: 0, ResultPreScale: 1);
_StressXY.EvaluateEdge(j0, Len, Ns, StressXYRes, StressXYRes, ResultIndexOffset: 0, ResultPreScale: 1);
_StressYY.EvaluateEdge(j0, Len, Ns, StressYYRes, StressYYRes, ResultIndexOffset: 0, ResultPreScale: 1);
//if (LsTrk.GridDat.SpatialDimension == 2)
//{
for (int j = 0; j < Len; j++)
{
for (int k = 0; k < K; k++)
{
double acc = 0.0;
// pressure
switch (d)
{
case 0:
acc += pARes[j, k] * Normals[j, k, 0];
acc -= (2 * muA * beta) * Grad_URes[j, k, 0] * Normals[j, k, 0];
acc -= (muA * beta) * Grad_URes[j, k, 1] * Normals[j, k, 1];
acc -= (muA * beta) * Grad_VRes[j, k, 0] * Normals[j, k, 1];
acc -= (muA) * StressXXRes[j, k] * Normals[j, k, 0];
acc -= (muA) * StressXYRes[j, k] * Normals[j, k, 1];
break;
case 1:
acc += pARes[j, k] * Normals[j, k, 1];
acc -= (2 * muA * beta) * Grad_VRes[j, k, 1] * Normals[j, k, 1];
acc -= (muA * beta) * Grad_VRes[j, k, 0] * Normals[j, k, 0];
acc -= (muA * beta) * Grad_URes[j, k, 1] * Normals[j, k, 0];
acc -= (muA) * StressXYRes[j, k] * Normals[j, k, 0];
acc -= (muA) * StressYYRes[j, k] * Normals[j, k, 1];
break;
default:
throw new NotImplementedException();
}
result[j, k] = acc;
}
}
};
var SchemeHelper = LsTrk.GetXDGSpaceMetrics(new[] { LsTrk.GetSpeciesId("A") }, RequiredOrder, 1).XQuadSchemeHelper;
//EdgeMask Mask = new EdgeMask(LsTrk.GridDat, "Wall_bottom");
EdgeMask Mask = new EdgeMask(LsTrk.GridDat, "Wall_cylinder");
EdgeQuadratureScheme eqs = SchemeHelper.GetEdgeQuadScheme(LsTrk.GetSpeciesId("A"), IntegrationDomain: Mask);
EdgeQuadrature.GetQuadrature(new int[] { 1 }, LsTrk.GridDat,
eqs.Compile(LsTrk.GridDat, RequiredOrder), // agg.HMForder),
delegate(int i0, int Length, QuadRule QR, MultidimensionalArray EvalResult) {
ErrFunc(i0, Length, QR.Nodes, EvalResult.ExtractSubArrayShallow(-1, -1, 0));
},
delegate(int i0, int Length, MultidimensionalArray ResultsOfIntegration) {
for (int i = 0; i < Length; i++)
{
forces[d] += ResultsOfIntegration[i, 0];
}
}
).Execute();
}
for (int i = 0; i < D; i++)
{
forces[i] = MPI.Wrappers.MPIExtensions.MPISum(forces[i]);
}
return(forces);
}
/// <summary>
/// <see cref="INonlinearFlux.InnerEdgeFlux"/>
/// </summary>
public override void InnerEdgeFlux(
double time,
int jEdge,
MultidimensionalArray x,
MultidimensionalArray normal,
MultidimensionalArray[] Uin,
MultidimensionalArray[] Uout,
int Offset,
int Length,
MultidimensionalArray Output)
{
int NoOfNodes = Uin[0].GetLength(1);
int D = CompressibleEnvironment.NumberOfDimensions;
double gamma = this.material.EquationOfState.HeatCapacityRatio;
double Mach = this.material.MachNumber;
double MachScaling = gamma * Mach * Mach;
for (int e = 0; e < Length; e++)
{
for (int n = 0; n < NoOfNodes; n++)
{
double densityIn = Uin[0][e + Offset, n];
double densityOut = Uout[0][e + Offset, n];
double momentumSquareIn = 0.0;
double momentumSquareOut = 0.0;
double normalVelocityIn = 0.0;
double normalVelocityOut = 0.0;
for (int d = 0; d < D; d++)
{
momentumSquareIn += Uin[d + 1][e + Offset, n] * Uin[d + 1][e + Offset, n];
momentumSquareOut += Uout[d + 1][e + Offset, n] * Uout[d + 1][e + Offset, n];
normalVelocityIn += Uin[d + 1][e + Offset, n] * normal[e + Offset, n, d];
normalVelocityOut += Uout[d + 1][e + Offset, n] * normal[e + Offset, n, d];
}
normalVelocityIn /= densityIn;
normalVelocityOut /= densityOut;
double energyIn = Uin[D + 1][e + Offset, n];
double energyOut = Uout[D + 1][e + Offset, n];
double pIn = (gamma - 1.0) * (energyIn - MachScaling * 0.5 * momentumSquareIn / densityIn);
double pOut = (gamma - 1.0) * (energyOut - MachScaling * 0.5 * momentumSquareOut / densityOut);
//pIn = Math.Max(pIn, ilPSP.Utils.BLAS.MachineEps);
//pOut = Math.Max(pOut, ilPSP.Utils.BLAS.MachineEps);
double speedOfSoundIn = Math.Sqrt(pIn / densityIn) / Mach;
double speedOfSoundOut = Math.Sqrt(pOut / densityOut) / Mach;
Debug.Assert(!double.IsNaN(speedOfSoundIn) || double.IsInfinity(speedOfSoundIn));
Debug.Assert(!double.IsNaN(speedOfSoundOut) || double.IsInfinity(speedOfSoundOut));
double densityMean = 0.5 * (densityIn + densityOut);
double pressureMean = 0.5 * (pIn + pOut);
double speedOfSoundMean = 0.5 * (speedOfSoundIn + speedOfSoundOut);
double velocityJump = normalVelocityOut - normalVelocityIn;
// Calculate the pressure estimate at the edge and use it to
// calculate the components of the correction factor qIn and qOut
double pStar = pressureMean - 0.5 * MachScaling * velocityJump * speedOfSoundMean * densityMean;
pStar = Math.Max(0.0, pStar);
double qIn = 1.0;
if (pStar > pIn)
{
qIn = Math.Sqrt(1.0 + 0.5 * (gamma + 1.0) * (pStar / pIn - 1.0) / gamma);
}
double qOut = 1.0;
if (pStar > pOut)
{
qOut = Math.Sqrt(1.0 + 0.5 * (gamma + 1.0) * (pStar / pOut - 1.0) / gamma);
}
// Determine the wave speeds
double waveSpeedIn = normalVelocityIn - speedOfSoundIn * qIn;
double waveSpeedOut = normalVelocityOut + speedOfSoundOut * qOut;
double cIn = densityIn * (waveSpeedIn - normalVelocityIn);
double cOut = densityOut * (waveSpeedOut - normalVelocityOut);
// cf. Toro2009, equation 10.70
double speedDiff = cOut * normalVelocityOut - cIn * normalVelocityIn;
//if (Math.Abs(speedDiff) < 1e-13) {
// speedDiff = 0.0;
//}
double pIn_minus_pOut = pIn - pOut;
//if (Math.Abs(pIn_minus_pOut) < 1e-13) {
// pIn_minus_pOut = 0.0;
//}
double intermediateWaveSpeed =
(speedDiff + pIn_minus_pOut / MachScaling) /
(cOut - cIn);
//double intermediateWaveSpeed =
// (cOut * normalVelocityOut - cIn * normalVelocityIn + (pIn - pOut) / MachScaling) /
// (cOut - cIn);
double edgeFlux = 0.0;
// cf. Toro2009, equation 10.71
if (intermediateWaveSpeed > 0.0)
{
edgeFlux = normalVelocityIn * densityIn;
if (waveSpeedIn <= 0.0)
{
double modifiedDensity = densityIn * (waveSpeedIn - normalVelocityIn)
/ (waveSpeedIn - intermediateWaveSpeed);
edgeFlux += waveSpeedIn * (modifiedDensity - densityIn);
}
}
else
{
edgeFlux = normalVelocityOut * densityOut;
if (waveSpeedOut >= 0.0)
{
double modifiedDensity = densityOut * (waveSpeedOut - normalVelocityOut)
/ (waveSpeedOut - intermediateWaveSpeed);
edgeFlux += waveSpeedOut * (modifiedDensity - densityOut);
}
}
Debug.Assert(!double.IsNaN(edgeFlux) || double.IsInfinity(edgeFlux));
Output[e + Offset, n] += edgeFlux;
}
}
}
public IEnumerable <IChunkRulePair <QuadRule> > GetQuadRuleSet(ExecutionMask mask, int order)
{
if (mask.MaskType != MaskType.Geometrical)
{
throw new ArgumentException("Expecting a geometrical mask.");
}
var standardVolumeRules = baseFactory.GetQuadRuleSet(mask, order);
var pointRules = rootFactory.GetQuadRuleSet(mask, order);
var result = new List <ChunkRulePair <QuadRule> >();
foreach (var chunkRulePair in standardVolumeRules)
{
foreach (int cell in chunkRulePair.Chunk.Elements)
{
QuadRule standardRule = chunkRulePair.Rule;
var pointRule = pointRules.Single(pair => pair.Chunk.i0 <= cell && pair.Chunk.JE > cell).Rule;
MultidimensionalArray gradientsAtRoots = tracker.DataHistories[0].Current.GetLevelSetGradients(pointRule.Nodes, cell, 1);
QuadRule modifiedRule;
switch (pointRule.NoOfNodes)
{
case 0:
case 1: {
// Cell not really cut
MultidimensionalArray levelSetValue = tracker.DataHistories[0].Current.GetLevSetValues(
new NodeSet(RefElement, new double[2]), cell, 1);
if (Math.Sign(levelSetValue.Storage[0]) < 0)
{
// Cell is completely void
QuadRule emptyRule = QuadRule.CreateEmpty(RefElement, 1, 2);
emptyRule.Nodes.LockForever();
modifiedRule = emptyRule;
}
else
{
// Cell is completely non-void
modifiedRule = standardRule;
}
}
break;
case 2: {
double a, b, c;
GetLevelSetApproximationCofficients(cell, pointRule.Nodes.GetRow(0), pointRule.Nodes.GetRow(1), out a, out b, out c);
double[] eqcv = Heqpol_coefficients(a, b, c);
modifiedRule = standardRule.CloneAs();
for (int i = 0; i < modifiedRule.NoOfNodes; i++)
{
double x = modifiedRule.Nodes[i, 0];
double y = modifiedRule.Nodes[i, 1];
// double[] v = new double[] {
// 1.0, x, x * x, y, x * y, y * y };
double v = eqcv[0] + eqcv[1] * x + eqcv[2] * x * x
+ eqcv[3] * y + eqcv[4] * x * y + eqcv[5] * y * y;
modifiedRule.Weights[i] *= v;
}
modifiedRule.Nodes.LockForever();
}
break;
case 4: {
// Assume only single interface
double[] xCoords = pointRule.Nodes.GetColumn(0);
double maxXDist = xCoords.Max() - xCoords.Min();
double[] yCoords = pointRule.Nodes.GetColumn(1);
double maxYDist = yCoords.Max() - yCoords.Min();
int orderingDirection;
if (maxXDist > maxYDist)
{
orderingDirection = 0;
}
else
{
orderingDirection = 1;
}
double[][] roots = new double[pointRule.NoOfNodes][];
for (int i = 0; i < roots.Length; i++)
{
roots[i] = new double[] { pointRule.Nodes[i, 0], pointRule.Nodes[i, 1] };
}
var orderedRoots = roots.OrderBy(t => t[orderingDirection]).ToArray();
// Now, do the equivalent polynomial thing
double a, b, c;
GetLevelSetApproximationCofficients(cell, orderedRoots[0], orderedRoots[1], out a, out b, out c);
double[] eqcv1 = Heqpol_coefficients(a, b, c);
GetLevelSetApproximationCofficients(cell, orderedRoots[2], orderedRoots[3], out a, out b, out c);
double[] eqcv2 = Heqpol_coefficients(a, b, c);
modifiedRule = standardRule.CloneAs();
for (int i = 0; i < modifiedRule.NoOfNodes; i++)
{
double x = modifiedRule.Nodes[i, 0];
double y = modifiedRule.Nodes[i, 1];
// double[] v = new double[] {
// 1.0, x, x * x, y, x * y, y * y };
double v1 = eqcv1[0] + eqcv1[1] * x + eqcv1[2] * x * x
+ eqcv1[3] * y + eqcv1[4] * x * y + eqcv1[5] * y * y;
double v2 = eqcv2[0] + eqcv2[1] * x + eqcv2[2] * x * x
+ eqcv2[3] * y + eqcv2[4] * x * y + eqcv2[5] * y * y;
modifiedRule.Weights[i] *= v1 * v2;
}
}
break;
default:
throw new NotImplementedException();
}
result.Add(new ChunkRulePair <QuadRule>(
Chunk.GetSingleElementChunk(cell), modifiedRule));
}
}
return(result);
}
/// <summary>
/// Returns the minimum and the maximum value of the DG field
/// This is a collective call, it must be invoked by all
/// MPI processes within the communicator; internally, it invokes MPI_Allreduce;
/// </summary>
/// <param name="max">
/// on all invoking MPI processes, the maximum value (over all processors) of
/// this field;
/// </param>
/// <param name="min">
/// on all invoking MPI processes, the minimum value (over all processors) of
/// this field;
/// </param>
/// <remarks>
/// to find the maximum value, this field is evaluated on each vertex and the center of the simplex.
/// </remarks>
/// <param name="cm">
/// optional domain restriction
/// </param>
/// <param name="jMaxGlob">
/// global cell index in which the maximum value <paramref name="max"/> was found
/// </param>
/// <param name="jMinGlob">
/// global cell index in which the maximum value <paramref name="min"/> was found
/// </param>
public void GetExtremalValues(out double min, out double max, out int jMinGlob, out int jMaxGlob, CellMask cm = null)
{
MPICollectiveWatchDog.Watch(csMPI.Raw._COMM.WORLD);
using (new FuncTrace()) {
int J = Basis.GridDat.iLogicalCells.NoOfLocalUpdatedCells;
// find maximum on this processor
// ------------------------------
// create node set
InitExtremalProbeNS();
// vectorisation of this method
int VectorSize = -1;
int N0 = m_ExtremalProbeNS[0].GetLength(0); // number of nodes
MultidimensionalArray fieldValues = new MultidimensionalArray(2);
IEnumerable <Chunk> all_chunks;
if (cm == null)
{
var _ch = new Chunk[1];
_ch[0].i0 = 0;
_ch[0].Len = J;
all_chunks = _ch;
}
else
{
all_chunks = cm;
}
double LocMax = -double.MaxValue, LocMin = double.MaxValue;
int jMinLoc = int.MaxValue, jMaxLoc = int.MaxValue;
foreach (Chunk chk in all_chunks)
{
VectorSize = this.GridDat.iGeomCells.GetNoOfSimilarConsecutiveCells(CellInfo.RefElementIndex_Mask, chk.i0, Math.Min(100, chk.Len)); // try to be a little vectorized;
int _J = chk.Len + chk.i0;
for (int j = chk.i0; j < _J; j += VectorSize)
{
if (j + VectorSize > _J)
{
VectorSize = _J - j;
}
int iKref = Basis.GridDat.iGeomCells.GetRefElementIndex(j);
int N = m_ExtremalProbeNS[iKref].GetLength(0);
if (fieldValues.GetLength(0) != VectorSize || fieldValues.GetLength(1) != N)
{
fieldValues = MultidimensionalArray.Create(VectorSize, N);
}
this.Evaluate(j, VectorSize, m_ExtremalProbeNS[iKref], fieldValues, 0.0);
// loop over cells ...
for (int jj = j; jj < j + VectorSize; jj++)
{
// loop over nodes ...
for (int n = 0; n < N; n++)
{
double vel = 0;
vel = fieldValues[jj - j, n];
if (vel > LocMax)
{
LocMax = vel;
jMaxLoc = jj;
}
if (vel < LocMin)
{
LocMin = vel;
jMinLoc = jj;
}
}
}
}
}
// find the maximum over all processes via MPI and return
// ------------------------------------------------------
if (Basis.GridDat.CellPartitioning.MpiSize > 1)
{
double[] total = new double[2];
double[] local = new double[] { LocMax, -LocMin };
unsafe
{
fixed(double *ploc = local, ptot = total)
{
csMPI.Raw.Allreduce((IntPtr)ploc, (IntPtr)ptot, 2, csMPI.Raw._DATATYPE.DOUBLE, csMPI.Raw._OP.MAX, csMPI.Raw._COMM.WORLD);
}
}
max = total[0];
min = -total[1];
int i0 = Basis.GridDat.CellPartitioning.i0;
int[] jGlob = new int[2];
if (max == LocMax)
{
// (at least one) global maximum on this processor
jGlob[0] = jMaxLoc + i0;
}
else
{
// maximum on some other processor
jGlob[0] = int.MaxValue;
}
if (min == LocMin)
{
// (at least one) global minimum on this processor
jGlob[1] = jMinLoc + i0;
}
else
{
// minimum on some other processor
jGlob[1] = int.MaxValue;
}
// in case of multiple global minimums/maximums, e.g. for a constant field, we return the lowest (jMaxGlob,jMinGlob)
int[] jGlobM = new int[2];
unsafe
{
fixed(int *ploc = jGlob, ptot = jGlobM)
{
csMPI.Raw.Allreduce((IntPtr)ploc, (IntPtr)ptot, 2, csMPI.Raw._DATATYPE.INT, csMPI.Raw._OP.MIN, csMPI.Raw._COMM.WORLD);
}
}
jMaxGlob = jGlob[0];
jMinGlob = jGlob[1];
}
else
{
min = LocMin;
max = LocMax;
jMaxGlob = jMaxLoc;
jMinGlob = jMinLoc;
}
}
}
/// <summary>
/// Vectorized implementation of <see cref="GetBoundaryState(double, Vector, Vector, StateVector)"/>
/// </summary>
public override void GetBoundaryState(MultidimensionalArray[] StateOut, double time, MultidimensionalArray X, MultidimensionalArray Normals, MultidimensionalArray[] StateIn, int Offset, int NoOfEdges, bool normalFlipped, Material material)
{
//Convection.OptimizedHLLCFlux.SupersonicInlet.Start();
if (X.Dimension != 3)
{
throw new ArgumentException();
}
int D = X.GetLength(2);
int NoOfNodes = X.GetLength(1);
if (StateIn.Length != D + 2)
{
throw new ArgumentException();
}
if (StateOut.Length != D + 2)
{
throw new ArgumentException();
}
bool is3D = D >= 3;
if (D < 2)
{
// base-implementation supports also 1D;
// The implementation here is (a bit) tuned for performance, we only support 2D and 3D;
// in 1D, performance is not so relevant anyway.
base.GetBoundaryState(StateOut, time, X, Normals, StateIn, Offset, NoOfEdges, normalFlipped, material);
return;
}
var Density = StateOut[0];
var Energy = StateOut[D + 1];
var MomentumX = StateOut[1];
var MomentumY = StateOut[2];
var MomentumZ = is3D ? StateOut[3] : null;
var DensityIn = StateIn[0];
//var EnergyIn = StateIn[D + 1];
//var MomentumXin = StateIn[1];
//var MomentumYin = StateIn[2];
//var MomentumZin = is3D ? StateIn[3] : null;
double MachScaling = material.EquationOfState.HeatCapacityRatio * material.MachNumber * material.MachNumber;
double[] xLocal = new double[D];
//Vector uOut = new Vector(D);
for (int e = 0; e < NoOfEdges; e++)
{
int edge = e + Offset;
// Loop over nodes
for (int n = 0; n < NoOfNodes; n++)
{
xLocal[0] = X[edge, n, 0];
xLocal[1] = X[edge, n, 1];
double uOut_x = VelocityFunctions[0](xLocal, time);
double uOut_y = VelocityFunctions[1](xLocal, time);
double uOut_z = 0.0;
double velocity_AbsSquare = uOut_x * uOut_x + uOut_y * uOut_y;
if (is3D)
{
xLocal[2] = X[edge, n, 2];
uOut_z = VelocityFunctions[2](xLocal, time);
velocity_AbsSquare += uOut_z * uOut_z;
}
#if DEBUG
var uOutVec = new Vector(D);
uOutVec.x = uOut_x;
uOutVec.y = uOut_y;
uOutVec.z = uOut_z;
StateVector stateBoundary = StateVector.FromPrimitiveQuantities(
material,
DensityFunction(xLocal, time),
uOutVec,
PressureFunction(xLocal, time));
#endif
double density = DensityFunction(xLocal, time);
double pressure = PressureFunction(xLocal, time);
Density[edge, n] = density;
MomentumX[edge, n] = uOut_x * density;
MomentumY[edge, n] = uOut_y * density;
if (is3D)
{
MomentumZ[edge, n] = uOut_z * density;
}
Energy[edge, n] = material.EquationOfState.GetInnerEnergy(density, pressure) + 0.5 * MachScaling * density * velocity_AbsSquare;
#if DEBUG
Debug.Assert(Density[edge, n].RelErrorSmallerEps(stateBoundary.Density), "density error");
for (int d = 0; d < D; d++)
{
Debug.Assert(StateOut[d + 1][edge, n].RelErrorSmallerEps(stateBoundary.Momentum[d]), "momentum error");
}
Debug.Assert(Energy[edge, n].RelErrorSmallerEps(stateBoundary.Energy), "energy error");
#endif
}
}
//Convection.OptimizedHLLCFlux.SupersonicInlet.Stop();
}
/// <summary>
/// Integrand evaluation.
/// </summary>
protected override void Evaluate(int i0, int Length, QuadRule rule, MultidimensionalArray EvalResult)
{
NodeSet NodesUntransformed = rule.Nodes;
int M = NodesUntransformed.GetLength(0);
int D = NodesUntransformed.GetLength(1);
// evaluate scalar function ans store result in 'EvalResult'
// =========================================================
Debug.Assert(!((m_func != null) && (m_funcEx != null)));
if (m_func != null || m_Map != null)
{
GridDat.TransformLocal2Global(NodesUntransformed, i0, Length, m_NodesTransformed, 0);
}
if (m_func != null)
{
MultidimensionalArray inp = m_NodesTransformed.ResizeShallow(new int[] { Length *M, D });
MultidimensionalArray outp = EvalResult.ResizeShallow(new int[] { Length *M });
m_func(inp, outp);
Debug.Assert(m_funcEx == null);
}
if (m_funcEx != null)
{
m_funcEx(i0, Length, NodesUntransformed, EvalResult.ExtractSubArrayShallow(-1, -1, 0));
Debug.Assert(m_func == null);
}
if (m_Map == null)
{
// L2 error branch
// +++++++++++++++
MultidimensionalArray fieldvals = EvalResult.ResizeShallow(new int[] { Length, NodesUntransformed.GetLength(0) });
m_Owner.Evaluate(i0, Length, NodesUntransformed, fieldvals, -1.0);
for (int j = 0; j < Length; j++)
{
for (int m = 0; m < M; m++)
{
double e;
e = EvalResult[j, m, 0];
EvalResult[j, m, 0] = e * e;
}
}
}
else
{
// arbitrary mapping branch
// ++++++++++++++++++++++++
MultidimensionalArray fieldvals = MultidimensionalArray.Create(new int[] { Length, NodesUntransformed.GetLength(0) });
m_Owner.Evaluate(i0, Length, NodesUntransformed, fieldvals, -1.0);
double[] X = new double[D];
for (int j = 0; j < Length; j++)
{
for (int m = 0; m < M; m++)
{
double e;
e = EvalResult[j, m, 0];
for (int d = 0; d < D; d++)
{
X[d] = m_NodesTransformed[j, m, d];
}
EvalResult[j, m, 0] = this.m_Map(X, fieldvals[j, m], e);
}
}
}
}
static void AddToCellBoundaryRule(T cbqr, NodeSet nodes, MultidimensionalArray weights, int iFace, double scl)
{
Debug.Assert(nodes.GetLength(0) == weights.GetLength(0));
if (nodes.GetLength(0) <= 0)
{
return;
}
if (cbqr.Nodes == null)
{
cbqr.Nodes = nodes;
Debug.Assert(cbqr.Weights == null);
cbqr.Weights = weights.CloneAs();
cbqr.Weights.Scale(scl);
cbqr.NumbersOfNodesPerFace[iFace] = nodes.GetLength(0);
}
else
{
int D = nodes.GetLength(1);
Debug.Assert(D == cbqr.Nodes.GetLength(1));
int L1 = cbqr.Nodes.GetLength(0);
int L2 = nodes.GetLength(0);
NodeSet newNodes = new NodeSet(cbqr.Nodes.RefElement, L1 + L2, D);
MultidimensionalArray newWeights = MultidimensionalArray.Create(L1 + L2);
int K = 0; // total number of nodes on all faces;
for (int k = 0; k < iFace; k++)
{
K += cbqr.NumbersOfNodesPerFace[k];
}
if (K > 0)
{
newNodes.ExtractSubArrayShallow(
new int[] { 0, 0 },
new int[] { K - 1, D - 1 }).Set(
cbqr.Nodes.ExtractSubArrayShallow(new int[] { 0, 0 }, new int[] { K - 1, D - 1 }));
newWeights.ExtractSubArrayShallow(
new int[] { 0 },
new int[] { K - 1 }).Set(
cbqr.Weights.ExtractSubArrayShallow(new int[] { 0 }, new int[] { K - 1 }));
}
newNodes.ExtractSubArrayShallow(new int[] { K, 0 }, new int[] { K + L2 - 1, D - 1 }).Set(nodes);
newWeights.ExtractSubArrayShallow(new int[] { K }, new int[] { K + L2 - 1 }).Acc(scl, weights);
if (K < L1)
{
newNodes.ExtractSubArrayShallow(
new int[] { K + L2, 0 },
new int[] { L1 + L2 - 1, D - 1 }).Set(
cbqr.Nodes.ExtractSubArrayShallow(new int[] { K, 0 }, new int[] { L1 - 1, D - 1 }));
newWeights.ExtractSubArrayShallow(
new int[] { K + L2 },
new int[] { L1 + L2 - 1 }).Set(
cbqr.Weights.ExtractSubArrayShallow(new int[] { K }, new int[] { L1 - 1 }));
}
cbqr.Nodes = newNodes;
cbqr.Nodes.LockForever();
cbqr.Weights = newWeights;
cbqr.NumbersOfNodesPerFace[iFace] += L2;
}
}
public override void RestictFromFullGrid <T, V>(T FullGridVector, V AggGridVector)
{
var fullMapping = new UnsetteledCoordinateMapping(this.XDGBasis);
if (FullGridVector.Count != fullMapping.LocalLength)
{
throw new ArgumentException("mismatch in vector length", "FullGridVector");
}
int L = this.LocalDim;
if (AggGridVector.Count != L)
{
throw new ArgumentException("mismatch in vector length", "AggGridVector");
}
var ag = this.AggGrid;
var agCls = ag.iLogicalCells.AggregateCellToParts;
int JAGG = ag.iLogicalCells.NoOfLocalUpdatedCells;
int Nmax = this.XDGBasis.MaximalLength;
int N = this.DGBasis.Length;
Debug.Assert(Nmax % N == 0);
var Buffer = MultidimensionalArray.Create(agCls.Max(cc => cc.Length), N);
var AggCoords = MultidimensionalArray.Create(N);
for (int jAgg = 0; jAgg < JAGG; jAgg++) // loop over all composite cells...
{
int[] agCl = agCls[jAgg];
int K = agCl.Length;
MultidimensionalArray FulCoords = (K * N == Buffer.Length) ? Buffer : Buffer.ExtractSubArrayShallow(new int[] { 0, 0 }, new int[] { K - 1, N - 1 });
int i0Agg = jAgg * Nmax, i0Full;
if (this.SpeciesIndexMapping[jAgg] == null)
{
// default branch:
// use restiction/prolongation from un-cut basis
// +++++++++++++++++++++++++++++++++++++++++++++
for (int k = 0; k < K; k++) // loop over the cells wich form the aggregated cell...
{
int jCell = agCl[k];
i0Full = jCell * Nmax;
for (int n = 0; n < N; n++)
{
FulCoords[k, n] = FullGridVector[n + i0Full];
}
}
MultidimensionalArray Trf = base.CompositeBasis[jAgg];
AggCoords.Clear();
AggCoords.Multiply(1.0, Trf, FulCoords, 0.0, "n", "kmn", "km");
int _i0 = jAgg * N;
for (int n = 0; n < N; n++)
{
AggGridVector[n + i0Agg] = AggCoords[n];
}
}
else
{
int NoSpc = this.NoOfSpecies[jAgg];
int[,] sim = SpeciesIndexMapping[jAgg];
Debug.Assert(sim.GetLength(0) == NoSpc);
Debug.Assert(sim.GetLength(1) == K);
for (int iSpcAgg = 0; iSpcAgg < NoSpc; iSpcAgg++)
{
for (int k = 0; k < K; k++) // loop over the cells wich form the aggregated cell...
{
int jCell = agCl[k];
int iSpcBase = sim[iSpcAgg, k];
if (iSpcBase < 0)
{
for (int n = 0; n < N; n++)
{
FulCoords[k, n] = 0;
}
}
else
{
i0Full = fullMapping.LocalUniqueCoordinateIndex(0, jCell, iSpcBase * N);
for (int n = 0; n < N; n++)
{
FulCoords[k, n] = FullGridVector[i0Full + n];
}
}
}
MultidimensionalArray Trf;
if (this.XCompositeBasis[jAgg] == null || this.XCompositeBasis[jAgg][iSpcAgg] == null)
{
Trf = base.CompositeBasis[jAgg];
}
else
{
Trf = this.XCompositeBasis[jAgg][iSpcAgg];
}
AggCoords.Clear();
AggCoords.Multiply(1.0, Trf, FulCoords, 0.0, "n", "kmn", "km");
for (int n = 0; n < N; n++)
{
AggGridVector[i0Agg + iSpcAgg * N + n] = AggCoords[n];
}
}
}
}
}
public void GetNormalsForCell(NodeSet Nodes, int jCell, int iFace, MultidimensionalArray NormalsOut, MultidimensionalArray QuadMetric, int Offset)
{
m_Owner.ParentGrid.iGeomEdges.GetNormalsForCell(Nodes, jCell, iFace, NormalsOut, QuadMetric, Offset);
}
public override void GetRestrictionMatrix(BlockMsrMatrix RST, MultigridMapping mgMap, int iF)
{
if (!object.ReferenceEquals(mgMap.AggBasis[iF], this))
{
throw new ArgumentException();
}
//MsrMatrix RST = new MsrMatrix(mgMap.Partitioning, mgMap.ProblemMapping);
int JAGG = this.AggGrid.iLogicalCells.NoOfLocalUpdatedCells;
int[] degrees = mgMap.DgDegree;
int NoFld = degrees.Length;
int N_rest; // = new int[NoFld];
int N_full; // = new int[NoFld];
{
BoSSS.Foundation.Basis b = mgMap.ProblemMapping.BasisS[iF];
BoSSS.Foundation.Basis NxB = (b is BoSSS.Foundation.XDG.XDGBasis) ? ((BoSSS.Foundation.XDG.XDGBasis)b).NonX_Basis : b;
N_rest = NxB.Polynomials[0].Where(poly => poly.AbsoluteDegree <= degrees[iF]).Count();
N_full = NxB.Length;
}
int mgMap_Offset = mgMap.Partitioning.i0;
for (int jAgg = 0; jAgg < JAGG; jAgg++)
{
int[] AgCell = this.AggGrid.iLogicalCells.AggregateCellToParts[jAgg];
int K = AgCell.Length;
int NoSpc_Agg = this.NoOfSpecies[jAgg]; // number of species in aggregate cell
for (int iSpc_Agg = 0; iSpc_Agg < NoSpc_Agg; iSpc_Agg++) // loop over all species in aggregate cell
{
{ // loop over DG fields in the mapping
int NROW = N_rest;
int NCOL = N_full;
Debug.Assert(mgMap.AggBasis[iF].GetLength(jAgg, degrees[iF]) == N_rest * NoSpc_Agg);
int i0Agg_Loc = mgMap.LocalUniqueIndex(iF, jAgg, N_rest * iSpc_Agg);
int i0Agg = i0Agg_Loc + mgMap_Offset;
Debug.Assert(i0Agg >= mgMap.Partitioning.i0);
Debug.Assert(i0Agg < mgMap.Partitioning.iE);
if (this.SpeciesIndexMapping[jAgg] == null)
{
Debug.Assert(NoSpc_Agg == 1);
Debug.Assert(NoSpc_Agg == 1);
// default branch:
// use restriction/prolongation from un-cut basis
// +++++++++++++++++++++++++++++++++++++++++++++
MultidimensionalArray Trf = base.CompositeBasis[jAgg];
for (int k = 0; k < K; k++) // loop over the cells which form the aggregated cell...
{
int jCell = AgCell[k];
int i0Full = mgMap.ProblemMapping.GlobalUniqueCoordinateIndex(iF, jCell, 0);
var Block = Trf.ExtractSubArrayShallow(k, -1, -1);
for (int nRow = 0; nRow < NROW; nRow++)
{
for (int nCol = 0; nCol < NCOL; nCol++)
{
RST[i0Agg + nRow, i0Full + nCol] = Block[nCol, nRow];
}
}
}
}
else
{
int NoSpc = this.NoOfSpecies[jAgg];
int[,] sim = SpeciesIndexMapping[jAgg];
Debug.Assert(sim.GetLength(0) == NoSpc);
Debug.Assert(sim.GetLength(1) == K);
MultidimensionalArray Trf;
if (this.XCompositeBasis[jAgg] == null || this.XCompositeBasis[jAgg][iSpc_Agg] == null)
{
Trf = base.CompositeBasis[jAgg];
}
else
{
Trf = this.XCompositeBasis[jAgg][iSpc_Agg];
}
for (int k = 0; k < K; k++) // loop over the cells which form the aggregated cell...
{
int jCell = AgCell[k];
int iSpcBase = sim[iSpc_Agg, k];
if (iSpcBase < 0)
{
//for(int n = 0; n < N; n++)
// FulCoords[k, n] = 0;
}
else
{
int i0Full = mgMap.ProblemMapping.GlobalUniqueCoordinateIndex(iF, jCell, iSpcBase * N_full);
var Block = Trf.ExtractSubArrayShallow(k, -1, -1);
for (int nRow = 0; nRow < NROW; nRow++)
{
for (int nCol = 0; nCol < NCOL; nCol++)
{
RST[i0Agg + nRow, i0Full + nCol] = Block[nCol, nRow];
}
}
}
}
}
}
}
}
//return RST;
}
/// <summary>
/// Computes the maximum admissible step-size according to
/// GassnerEtAl2008, equation 67.
/// </summary>
/// <param name="i0"></param>
/// <param name="Length"></param>
/// <returns></returns>
protected override double GetCFLStepSize(int i0, int Length)
{
int iKref = gridData.Cells.GetRefElementIndex(i0);
int noOfNodesPerCell = base.EvaluationPoints[iKref].NoOfNodes;
double scaling = Math.Max(4.0 / 3.0, config.EquationOfState.HeatCapacityRatio / config.PrandtlNumber);
DGField artificialViscosity = workingSet.ParameterFields.Where(c => c.Identification.Equals(Variables.ArtificialViscosity)).Single();
double cfl = double.MaxValue;
switch (speciesMap)
{
case ImmersedSpeciesMap ibmMap: {
MultidimensionalArray levelSetValues = ibmMap.Tracker.DataHistories[0].Current.GetLevSetValues(base.EvaluationPoints[iKref], i0, Length);
SpeciesId species = ibmMap.Tracker.GetSpeciesId(ibmMap.Control.FluidSpeciesName);
var hMinArray = ibmMap.CellAgglomeration.CellLengthScales[species];
for (int i = 0; i < Length; i++)
{
int cell = i0 + i;
double hminlocal = hMinArray[cell];
double nu = artificialViscosity.GetMeanValue(cell) / config.ReynoldsNumber;
Debug.Assert(!double.IsNaN(nu), "IBM ArtificialViscosityCFLConstraint: nu is NaN");
bool setCFL = false;
for (int node = 0; node < noOfNodesPerCell; node++)
{
if (levelSetValues[i, node].Sign() != (double)ibmMap.Control.FluidSpeciesSign)
{
continue;
}
else if (setCFL == false)
{
setCFL = true;
}
}
if (nu != 0 && setCFL)
{
double cflCell = hminlocal * hminlocal / scaling / nu;
Debug.Assert(!double.IsNaN(cflCell), "Could not determine CFL number");
cfl = Math.Min(cfl, cflCell);
}
}
}
break;
default: {
for (int i = 0; i < Length; i++)
{
int cell = i0 + i;
double hminlocal = gridData.Cells.h_min[cell];
double nu = artificialViscosity.GetMeanValue(cell) / config.ReynoldsNumber;
Debug.Assert(!double.IsNaN(nu), "ArtificialViscosityCFLConstraint: nu is NaN");
if (nu != 0)
{
double cflCell = hminlocal * hminlocal / scaling / nu;
Debug.Assert(!double.IsNaN(cflCell), "Could not determine CFL number");
cfl = Math.Min(cfl, cflCell);
}
}
}
break;
}
if (cfl == double.MaxValue)
{
return(cfl);
}
else
{
int degree = workingSet.ConservativeVariables.Max(f => f.Basis.Degree);
int twoNPlusOne = 2 * degree + 1;
return(cfl * GetBetaMax(degree) / twoNPlusOne / twoNPlusOne / Math.Sqrt(CNSEnvironment.NumberOfDimensions));
}
}
/// <summary>
/// ctor.
/// </summary>
public EllipticReinitForm(BitArray _AcceptedBitmask, int __jCell, double __penaltyBase, MultidimensionalArray __cj)
{
this.AcceptedBitmask = _AcceptedBitmask;
this.penaltyBase = __penaltyBase;
this.jCell = __jCell;
this.cj = __cj;
if (this.AcceptedBitmask[this.jCell])
{
throw new ArgumentException("Cannot work on accepted cells.");
}
}
public void DefineMatrix(IMutableMatrixEx M)
{
FullMatrix = M.ToFullMatrixOnProc0();
}
/// <summary>
/// Accumulates <paramref name="Block"/>*<paramref name="alpha"/> to this matrix,
/// at the row/column offset <paramref name="i0"/> resp. <paramref name="j0"/>.
/// </summary>
/// <param name="i0">Row offset.</param>
/// <param name="j0">Column offset.</param>
/// <param name="alpha">Scaling factor for the accumulation operation.</param>
/// <param name="Block">Block to accumulate.</param>
public void AccBlock(int i0, int j0, double alpha, MultidimensionalArray Block)
{
this.AccBlock(i0, j0, alpha, Block, 1.0);
}
public void Dispose()
{
FullMatrix = null;
}
private QuadRule CombineQr(QuadRule qrEdge, CellBoundaryQuadRule givenRule, int iFace)
{
int D = grd.SpatialDimension;
var volSplx = m_cellBndQF.RefElement;
int coD = D - 1;
Debug.Assert(this.RefElement.SpatialDimension == coD);
// extract edge rule
// -----------------
int i0 = 0, iE = 0;
for (int i = 0; i < iFace; i++)
{
i0 += givenRule.NumbersOfNodesPerFace[i];
}
iE = i0 + givenRule.NumbersOfNodesPerFace[iFace] - 1;
if (iE < i0)
{
// rule is empty (measure is zero).
if (qrEdge == null)
{
QuadRule ret = new QuadRule();
ret.OrderOfPrecision = int.MaxValue - 1;
ret.Nodes = new NodeSet(this.RefElement, 1, Math.Max(1, D - 1));
ret.Weights = MultidimensionalArray.Create(1); // this is an empty rule, since the weight is zero!
// (rules with zero nodes may cause problems at various places.)
return(ret);
}
else
{
qrEdge.Nodes.Scale(0.5);
qrEdge.Weights.Scale(0.5);
return(qrEdge);
}
}
MultidimensionalArray NodesVol = givenRule.Nodes.ExtractSubArrayShallow(new int[] { i0, 0 }, new int[] { iE, D - 1 });
MultidimensionalArray Weigts = givenRule.Weights.ExtractSubArrayShallow(new int[] { i0 }, new int[] { iE }).CloneAs();
NodeSet Nodes = new NodeSet(this.RefElement, iE - i0 + 1, coD);
volSplx.GetInverseFaceTrafo(iFace).Transform(NodesVol, Nodes);
Nodes.LockForever();
//Debug.Assert((Weigts.Sum() - grd.Grid.GridSimplex.EdgeSimplex.Volume).Abs() < 1.0e-6, "i've forgotten the gramian");
// combine
// -------
if (qrEdge == null)
{
// no rule defined yet - just set the one we have got
// ++++++++++++++++++++++++++++++++++++++++++++++++++
qrEdge = new QuadRule();
qrEdge.Weights = Weigts;
qrEdge.Nodes = Nodes;
qrEdge.OrderOfPrecision = givenRule.OrderOfPrecision;
}
else
{
// take the mean of already defined and new rule
// +++++++++++++++++++++++++++++++++++++++++++++
int L1 = qrEdge.Nodes.GetLength(0);
int L2 = Nodes.GetLength(0);
Debug.Assert(coD == qrEdge.Nodes.GetLength(1));
NodeSet newNodes = new NodeSet(this.RefElement, L1 + L2, coD);
newNodes.SetSubArray(qrEdge.Nodes, new int[] { 0, 0 }, new int[] { L1 - 1, coD - 1 });
newNodes.SetSubArray(Nodes, new int[] { L1, 0 }, new int[] { L1 + L2 - 1, coD - 1 });
newNodes.LockForever();
MultidimensionalArray newWeights = MultidimensionalArray.Create(L1 + L2);
newWeights.AccSubArray(0.5, qrEdge.Weights, new int[] { 0 }, new int[] { L1 - 1 });
newWeights.AccSubArray(0.5, Weigts, new int[] { L1 }, new int[] { L1 + L2 - 1 });
double oldSum = qrEdge.Weights.Sum();
double newSum = Weigts.Sum();
WeightInbalance += Math.Abs(oldSum - newSum);
qrEdge.Nodes = newNodes;
qrEdge.Weights = newWeights;
qrEdge.OrderOfPrecision = Math.Min(qrEdge.OrderOfPrecision, givenRule.OrderOfPrecision);
}
// return
// ------
return(qrEdge);
}
/// <summary>
/// Calculates the Torque around the center of mass
/// </summary>
/// <param name="U"></param>
/// <param name="P"></param>
/// <param name="momentFittingVariant"></param>
/// <param name="muA"></param>
/// <param name="particleRadius"></param>
/// <returns></returns>
static public void GetCellValues(VectorField <XDGField> U, XDGField P,
double muA, double particleRadius, SinglePhaseField P_atIB, SinglePhaseField gradU_atIB, SinglePhaseField gradUT_atIB)
{
var LsTrk = U[0].Basis.Tracker;
int D = LsTrk.GridDat.SpatialDimension;
var UA = U.Select(u => u.GetSpeciesShadowField("A")).ToArray();
if (D > 2)
{
throw new NotImplementedException("Currently only 2D cases supported");
}
int RequiredOrder = U[0].Basis.Degree * 3 + 2;
//if (RequiredOrder > agg.HMForder)
// throw new ArgumentException();
Console.WriteLine("Cell values calculated by: {0}, order = {1}", LsTrk.CutCellQuadratureType, RequiredOrder);
ConventionalDGField pA = null;
double circumference = new double();
pA = P.GetSpeciesShadowField("A");
for (int n = 0; n < 4; n++)
{
ScalarFunctionEx ErrFunc_CellVal = delegate(int j0, int Len, NodeSet Ns, MultidimensionalArray result) {
int K = result.GetLength(1); // No nof Nodes
MultidimensionalArray Grad_UARes = MultidimensionalArray.Create(Len, K, D, D);;
MultidimensionalArray pARes = MultidimensionalArray.Create(Len, K);
// Evaluate tangential velocity to level-set surface
var Normals = LsTrk.DataHistories[0].Current.GetLevelSetNormals(Ns, j0, Len);
for (int i = 0; i < D; i++)
{
UA[i].EvaluateGradient(j0, Len, Ns, Grad_UARes.ExtractSubArrayShallow(-1, -1, i, -1));
}
pA.Evaluate(j0, Len, Ns, pARes);
for (int j = 0; j < Len; j++)
{
for (int k = 0; k < K; k++)
{
double acc = 0.0;
double acc2 = 0.0;
switch (n)
{
case 0: // Pressure part
acc += pARes[j, k] * Normals[j, k, 0];
acc *= -Normals[j, k, 1] * particleRadius;
acc2 += pARes[j, k] * Normals[j, k, 1];
acc2 *= Normals[j, k, 0] * particleRadius;
result[j, k] = acc + acc2;
break;
case 1: // GradU part
acc -= (1 * muA) * Grad_UARes[j, k, 0, 0] * Normals[j, k, 0]; // Attention was 2 times
acc -= (muA) * Grad_UARes[j, k, 0, 1] * Normals[j, k, 1];
acc *= -Normals[j, k, 1] * particleRadius;
acc2 -= (1 * muA) * Grad_UARes[j, k, 1, 1] * Normals[j, k, 1];
acc2 -= (muA) * Grad_UARes[j, k, 1, 0] * Normals[j, k, 0];
acc2 *= Normals[j, k, 0] * particleRadius;
result[j, k] = acc + acc2;
break;
case 2: // GradU_T part
acc -= (1 * muA) * Grad_UARes[j, k, 0, 0] * Normals[j, k, 0]; // Attention was 2 times
acc -= (muA) * Grad_UARes[j, k, 1, 0] * Normals[j, k, 1];
acc *= -Normals[j, k, 1] * particleRadius;
acc2 -= (1 * muA) * Grad_UARes[j, k, 1, 1] * Normals[j, k, 1]; // Attention was 2 times
acc2 -= (muA) * Grad_UARes[j, k, 0, 1] * Normals[j, k, 0];
acc2 *= Normals[j, k, 0] * particleRadius;
result[j, k] = acc + acc2;
break;
case 3: // Standardization with radians
result[j, k] = 1;
break;
default:
throw new NotImplementedException();
}
}
}
};
var SchemeHelper = LsTrk.GetXDGSpaceMetrics(new[] { LsTrk.GetSpeciesId("A") }, RequiredOrder, 1).XQuadSchemeHelper; // new XQuadSchemeHelper(LsTrk, momentFittingVariant, );
CellQuadratureScheme cqs = SchemeHelper.GetLevelSetquadScheme(0, LsTrk.Regions.GetCutCellMask());
CellQuadrature.GetQuadrature(new int[] { 1 }, LsTrk.GridDat,
cqs.Compile(LsTrk.GridDat, RequiredOrder),
delegate(int i0, int Length, QuadRule QR, MultidimensionalArray EvalResult) {
ErrFunc_CellVal(i0, Length, QR.Nodes, EvalResult.ExtractSubArrayShallow(-1, -1, 0));
},
delegate(int i0, int Length, MultidimensionalArray ResultsOfIntegration) {
for (int i = 0; i < Length; i++)
{
switch (n)
{
case 0:
P_atIB.SetMeanValue(i0, ResultsOfIntegration[i, 0]);
break;
case 1:
gradU_atIB.SetMeanValue(i0, ResultsOfIntegration[i, 0]);
break;
case 2:
gradUT_atIB.SetMeanValue(i0, ResultsOfIntegration[i, 0]);
break;
case 3:
circumference += ResultsOfIntegration[i, 0];
P_atIB.SetMeanValue(i0, P_atIB.GetMeanValue(i0) / ResultsOfIntegration[i, 0]);
gradU_atIB.SetMeanValue(i0, gradU_atIB.GetMeanValue(i0) / ResultsOfIntegration[i, 0]);
gradUT_atIB.SetMeanValue(i0, gradUT_atIB.GetMeanValue(i0) / ResultsOfIntegration[i, 0]);
break;
default:
throw new NotImplementedException();
}
}
}
).Execute();
}
Console.WriteLine("Circle circumference: " + circumference);
}
