//---------------------------------------------------------------------
public static void Initialize(double[,] establishProbabilities,
SeedingAlgorithm seedingAlgorithm,
Delegates.AddNewCohort addNewCohort)
{
Reproduction.establishProbabilities = establishProbabilities;
seeding = new Seeding(seedingAlgorithm);
Reproduction.addNewCohort = addNewCohort;
cohorts = Model.Core.SuccessionCohorts as AgeCohort.ILandscapeCohorts;
if (cohorts == null)
{
throw new ApplicationException("The succession plug-in's cohorts don't support age-cohort interface");
}
speciesDataset = Model.Core.Species;
int speciesCount = speciesDataset.Count;
resprout = Model.Core.Landscape.NewSiteVar <BitArray>();
serotiny = Model.Core.Landscape.NewSiteVar <BitArray>();
foreach (ActiveSite site in Model.Core.Landscape.ActiveSites)
{
resprout[site] = new BitArray(speciesCount);
serotiny[site] = new BitArray(speciesCount);
}
planting = new Planting();
trySeeding = new BlockRowBuffer <bool>(Model.Core.Landscape);
hasSeeded = new BlockRowBuffer <BitArray>(Model.Core.Landscape);
for (int col = 1; col <= hasSeeded.Columns; col++)
{
hasSeeded[col] = new BitArray(speciesCount);
}
}
//---------------------------------------------------------------------
//public static void Initialize(double[,] establishProbabilities,
public static void Initialize(SeedingAlgorithm seedingAlgorithm,
Delegates.AddNewCohort addNewCohort)
{
// Reproduction.establishProbabilities = establishProbabilities;
seeding = new Seeding(seedingAlgorithm);
Reproduction.addNewCohort = addNewCohort;
SiteVars.Cohorts = Model.Core.GetSiteVar <SiteCohorts>("Succession.Cohorts");
speciesDataset = Model.Core.Species;
int speciesCount = speciesDataset.Count;
resprout = Model.Core.Landscape.NewSiteVar <BitArray>();
serotiny = Model.Core.Landscape.NewSiteVar <BitArray>();
noEstablish = Model.Core.Landscape.NewSiteVar <bool>();
foreach (ActiveSite site in Model.Core.Landscape.ActiveSites)
{
resprout[site] = new BitArray(speciesCount);
serotiny[site] = new BitArray(speciesCount);
}
noEstablish.ActiveSiteValues = false;
planting = new Planting();
}
//---------------------------------------------------------------------
public static void Initialize(SeedingAlgorithm seedingAlgorithm)
{
seeding = new Seeding(seedingAlgorithm);
speciesDataset = Model.Core.Species;
int speciesCount = speciesDataset.Count;
resprout = Model.Core.Landscape.NewSiteVar <BitArray>();
serotiny = Model.Core.Landscape.NewSiteVar <BitArray>();
noEstablish = Model.Core.Landscape.NewSiteVar <bool>();
foreach (ActiveSite site in Model.Core.Landscape.ActiveSites)
{
resprout[site] = new BitArray(speciesCount);
serotiny[site] = new BitArray(speciesCount);
}
noEstablish.ActiveSiteValues = false;
planting = new Planting();
}
//---------------------------------------------------------------------
public static void Initialize(double[,] establishProbabilities,
SeedingAlgorithm seedingAlgorithm,
Delegates.AddNewCohort addNewCohort)
{
Reproduction.establishProbabilities = establishProbabilities;
seeding = new Seeding(seedingAlgorithm);
Reproduction.addNewCohort = addNewCohort;
cohorts = Model.Core.SuccessionCohorts as AgeCohort.ILandscapeCohorts;
if (cohorts == null)
throw new ApplicationException("The succession plug-in's cohorts don't support age-cohort interface");
speciesDataset = Model.Core.Species;
int speciesCount = speciesDataset.Count;
resprout = Model.Core.Landscape.NewSiteVar<BitArray>();
serotiny = Model.Core.Landscape.NewSiteVar<BitArray>();
foreach (ActiveSite site in Model.Core.Landscape.ActiveSites) {
resprout[site] = new BitArray(speciesCount);
serotiny[site] = new BitArray(speciesCount);
}
planting = new Planting();
}
//---------------------------------------------------------------------
public static void Initialize(SeedingAlgorithm seedingAlgorithm)
{
seeding = new Seeding(seedingAlgorithm);
speciesDataset = Model.Core.Species;
int speciesCount = speciesDataset.Count;
resprout = Model.Core.Landscape.NewSiteVar<BitArray>();
serotiny = Model.Core.Landscape.NewSiteVar<BitArray>();
noEstablish = Model.Core.Landscape.NewSiteVar<bool>();
foreach (ActiveSite site in Model.Core.Landscape.ActiveSites) {
resprout[site] = new BitArray(speciesCount);
serotiny[site] = new BitArray(speciesCount);
}
noEstablish.ActiveSiteValues = false;
planting = new Planting();
}
//---------------------------------------------------------------------
//public static void Initialize(double[,] establishProbabilities,
public static void Initialize(SeedingAlgorithm seedingAlgorithm,
Delegates.AddNewCohort addNewCohort)
{
// Reproduction.establishProbabilities = establishProbabilities;
seeding = new Seeding(seedingAlgorithm);
Reproduction.addNewCohort = addNewCohort;
SiteVars.Cohorts = Model.Core.GetSiteVar<SiteCohorts>("Succession.Cohorts");
speciesDataset = Model.Core.Species;
int speciesCount = speciesDataset.Count;
resprout = Model.Core.Landscape.NewSiteVar<BitArray>();
serotiny = Model.Core.Landscape.NewSiteVar<BitArray>();
noEstablish = Model.Core.Landscape.NewSiteVar<bool>();
foreach (ActiveSite site in Model.Core.Landscape.ActiveSites) {
resprout[site] = new BitArray(speciesCount);
serotiny[site] = new BitArray(speciesCount);
}
noEstablish.ActiveSiteValues = false;
planting = new Planting();
}
