Skip to content

a479304861/Ds-Builder-Windows

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

3 Commits
 
 
 
 
 
 
 
 
 
 
 
 

Repository files navigation

DS-Builder-Windows使用说明

编译

基于各电脑的dotnet版本不同,我们需要进行用户自行编译,首先检查dotnet环境

dotnet --version

安装环境后进入到./drimmCode目录中,使用以下命令进行编译

dotnet publish -c Release -r win-x64

执行

python ./program.py -h

使用以下命令进行样例输入,-i 表示tsv与gff后缀文件路径,必须保证tsv与gff放在同一文件夹,-o 表示当前输入结果文件路径,

python program.py -i .\input\ -o .\output  -c 20

如果出现以下找不到路径情况,为未编译。请进行编译

出现以下输出才为正常输出

参数含义

-i inputPath : Please enter the inputPath

-o Outpath : Please enter the path generated by the output file

[-s] MaxGeneDupLength : You can enter the size you want to filter. The default value is 4

[-c] CycleLength : Minimum cycle length in DRIMM-Synteny algorithm. The default value is 20

[-d] DustLength : Maximum genetic diversity in DRIMM-Synteny algorithm. The default value is 20

[-p] SimplePercentage : Percentage of production simplification, ranging from 0 to 1. The default value is 0.5

About

Ds-Builder-Windows

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published