public void ViaSocketWriter()
{
var ranges = new RangeCollection();
var fileStream = new FileStream(@"C:\Users\jgauffin\Downloads\AspNetMVC3ToolsUpdateSetup.exe", FileMode.Open,
FileAccess.Read, FileShare.ReadWrite);
ranges.Parse("bytes=0-50000", (int)fileStream.Length);
var stream = new ByteRangeStream(ranges, fileStream);
var job = new StreamSocketWriterJob(stream);
var buffer = new byte[65535];
var args = Substitute.For<SocketAsyncEventArgs>();
args.UserToken.Returns(buffer);
job.Write(args);
while (true)
{
if (job.WriteCompleted(5000))
{
job.Dispose();
break;
}
job.Write(args);
}
}
public void ViaSocketWriter()
{
var ranges = new RangeCollection();
var fileStream = new FileStream(@"C:\Users\jgauffin\Downloads\AspNetMVC3ToolsUpdateSetup.exe", FileMode.Open,
FileAccess.Read, FileShare.ReadWrite);
ranges.Parse("bytes=0-50000", (int)fileStream.Length);
var stream = new ByteRangeStream(ranges, fileStream);
var job = new StreamSocketWriterJob(stream);
var buffer = new byte[65535];
var args = Substitute.For <SocketAsyncEventArgs>();
args.UserToken.Returns(buffer);
job.Write(args);
while (true)
{
if (job.WriteCompleted(5000))
{
job.Dispose();
break;
}
job.Write(args);
}
}
private static void SubmitQueue(int taskPerJobCount, string caseName, RangeCollection nullIndexRangeCollection, ICluster cluster, string id, string password, Queue <ITask> taskQueue)
{
while (taskQueue.Count != 0)
{
IJob job = cluster.CreateJob();
string firstPieceIndex = null, lastPieceIndex = null;
for (int iTaskPerJob = 0; iTaskPerJob < taskPerJobCount; ++iTaskPerJob)
{
ITask task = taskQueue.Dequeue();
string taskPieceIndex = task.Name.Split(' ')[1];
if (iTaskPerJob == 0)
{
firstPieceIndex = taskPieceIndex.ToString();
}
lastPieceIndex = taskPieceIndex;
job.AddTask(task);
job.Runtime = task.Runtime;
if (taskQueue.Count == 0)
{
break;
}
}
string jobName = SpecialFunctions.CreateTabString(caseName, firstPieceIndex + "-" + lastPieceIndex,
nullIndexRangeCollection).Replace("\t", " "); //!!!create a nicer way to make a space delimited list
job.Name = jobName.Substring(0, Math.Min(jobName.Length, 70));
Console.WriteLine(job.Name);
job.IsExclusive = false;
cluster.AddJob(job);
cluster.SubmitJob(job.Id, id, password, true, 0);
}
}
public void AddTest2()
{
RangeCollection c = new RangeCollection();
List <AddressRange> ranges = c.Ranges;
c.Add(new AddressRange(0, 100));
c.Add(new AddressRange(101, 200));
Assert.AreEqual(1, ranges.Count, "#1");
Assert.AreEqual(new AddressRange(0, 200), ranges[0], "#1b");
c.Add(new AddressRange(300, 400));
c.Add(new AddressRange(500, 600));
Assert.AreEqual(3, ranges.Count, "#2");
c.Add(new AddressRange(50, 205));
Assert.AreEqual(3, ranges.Count, "#3");
Assert.AreEqual(new AddressRange(0, 205), ranges[0], "#3b");
c.Add(new AddressRange(-100, -1));
Assert.AreEqual(3, ranges.Count, "#4");
Assert.AreEqual(new AddressRange(-100, 205), ranges[0], "#4b");
c.Add(new AddressRange(206, 299));
Assert.AreEqual(2, ranges.Count, "#5");
Assert.AreEqual(new AddressRange(-100, 400), ranges[0], "#5b");
c.Add(new AddressRange(0, 600));
Assert.AreEqual(1, ranges.Count, "#6");
Assert.AreEqual(new AddressRange(-100, 600), ranges[0], "#6b");
}
//public ObservableCollection<ImageItem> Source = new ObservableCollection<ImageItem>();
public async Task Init()
{
var queryOptions = new QueryOptions(CommonFileQuery.OrderByDate,
new string[] { ".jpg", ".png", ".jpeg", ".bmp" })
{
FolderDepth = FolderDepth.Deep,
IndexerOption = IndexerOption.OnlyUseIndexer,
UserSearchFilter = "System.Kind:=System.Kind#Picture"
};
queryOptions.SetThumbnailPrefetch(ThumbnailMode.SingleItem, 256, ThumbnailOptions.UseCurrentScale);
var _fileQueryResult = KnownFolders.PicturesLibrary.CreateFileQueryWithOptions(queryOptions);
var files = await _fileQueryResult.GetFilesAsync();
Debug.WriteLine("Count " + files.Count);
var list = new List<ImageItem>();
foreach (var f in files)
{
list.Add(new ImageItem()
{
LocalPath = f.Path
});
}
Source = new RangeCollection(list);
Source.Init();
}
public override void RunTasks(RangeCollection tasksToRun, long taskCount)
{
var allTheWorkQuery = InputFile.ReadEachLine();
var myWorkAndAnIndex = SpecialFunctions.DivideWork(allTheWorkQuery, tasksToRun, taskCount, 1, new RangeCollection());
double myTotal = double.NaN;
bool isFirst = true;
foreach (var numberAndIndex in myWorkAndAnIndex)
{
double number = double.Parse(numberAndIndex.Key);
Thread.Sleep(SleepMilliseconds); //make the work take longer
if (isFirst)
{
myTotal = number;
isFirst = false;
}
else
{
myTotal = Operator.Aggregate(myTotal, number);
}
}
if (!isFirst) // make sure we actually did something.
{
//var myUniqueResultFileName = GetFileTaskFileName(tasksToRun.ToString());
//ResultFile = new FileInfo(myUniqueResultFileName);
using (TextWriter writer = File.CreateText(ResultFile.FullName))
{
writer.WriteLine(myTotal);
}
}
}
public void IndexerForPositiveBadIndex()
{
RangeCollection range = new RangeCollection();
range.Add(1);
Assert.AreEqual(0, range[1]);
}
public void IndexOf()
{
var range = new RangeCollection {
0,
2,
3,
5,
6,
7,
8,
11,
12,
13
};
Assert.AreEqual(0, range.IndexOf(0));
Assert.AreEqual(1, range.IndexOf(2));
Assert.AreEqual(2, range.IndexOf(3));
Assert.AreEqual(3, range.IndexOf(5));
Assert.AreEqual(4, range.IndexOf(6));
Assert.AreEqual(5, range.IndexOf(7));
Assert.AreEqual(6, range.IndexOf(8));
Assert.AreEqual(7, range.IndexOf(11));
Assert.AreEqual(8, range.IndexOf(12));
Assert.AreEqual(9, range.IndexOf(13));
Assert.AreEqual(-1, range.IndexOf(99));
}
public void IndexesCacheGeneration()
{
RangeCollection range = new RangeCollection();
int [] index_cache = range.Indexes;
Assert.AreSame(index_cache, range.Indexes);
range.Add(0);
range.Add(5);
if (index_cache == range.Indexes)
{
Assert.Fail("Indexes Cache not regenerated after change");
}
index_cache = range.Indexes;
range.Remove(0);
range.Add(3);
if (index_cache == range.Indexes)
{
Assert.Fail("Indexes Cache not regenerated after change");
}
}
public void NegativeIndices()
{
RangeCollection c = new RangeCollection();
c.Add(-10);
c.Add(-5);
c.Add(5);
c.Add(-8);
c.Add(10);
c.Add(-9);
c.Add(-11);
Assert.IsTrue(c.Contains(-10), "#1");
Assert.IsTrue(c.Contains(-5), "#2");
Assert.IsTrue(c.Contains(5), "#3");
Assert.IsTrue(c.Contains(-8), "#4");
Assert.AreEqual(4, c.RangeCount, "#5");
Assert.AreEqual(new RangeCollection.Range(-11, -8), c.Ranges[0], "#6");
Assert.AreEqual(new RangeCollection.Range(-5, -5), c.Ranges[1], "#7");
Assert.AreEqual(new RangeCollection.Range(5, 5), c.Ranges[2], "#8");
Assert.AreEqual(new RangeCollection.Range(10, 10), c.Ranges[3], "#9");
Assert.AreEqual(0, c.FindRangeIndexForValue(-9), "#10");
Assert.IsTrue(c.FindRangeIndexForValue(-7) < 0, "#11");
}
private static void _TestRanges(RangeCollection range, int [] indexes)
{
foreach (int index in indexes)
{
range.Add(index);
}
Assert.AreEqual(indexes.Length, range.Count);
Array.Sort(indexes);
int i = 0;
foreach (int index in range)
{
Assert.AreEqual(indexes[i++], index);
}
#pragma warning disable 0618
i = 0;
foreach (int index in range.Indexes)
{
Assert.AreEqual(indexes[i++], index);
}
for (i = 0; i < range.Indexes.Length; i++)
{
Assert.AreEqual(indexes[i], range.Indexes[i]);
}
#pragma warning restore 0618
}
static HlaAssignMain CreateProgramFromArguments(string[] args)
{
ArgCollection argCollection = ArgCollection.GetInstance(args);
if (argCollection.ExtractOptionalFlag("help"))
{
Console.WriteLine();
Console.WriteLine(UsageMessage);
Console.WriteLine(HelpMessage);
return(null);
}
bool bExcel = argCollection.ExtractOptionalFlag("EXCEL");
argCollection.CheckNoMoreOptions();
double?leakProbabilityOrNull = argCollection.ExtractNext <double?>("leakProbabilityOrNull");
double pValue = argCollection.ExtractNext <double>("pValue");
string directoryName = argCollection.ExtractNext <string>("directory");
string caseName = argCollection.ExtractNext <string>("caseName");
string hlaFactoryName = argCollection.ExtractNext <string>("hlaFactory");
RangeCollection pieceIndexRange = argCollection.ExtractNext <RangeCollection>("pieceIndexRange");
int pieceCount = argCollection.ExtractNext <int>("pieceCount");
SpecialFunctions.CheckCondition(0 <= pieceIndexRange.FirstElement && pieceIndexRange.LastElement < pieceCount, "The pieceIndexRange must be a subrange of " + RangeCollection.GetInstance(0, pieceCount - 1).ToString());
RangeCollection nullIndexRange = argCollection.ExtractNext <RangeCollection>("nullIndexRange");
argCollection.CheckThatEmpty();
return(new HlaAssignMain(bExcel, leakProbabilityOrNull, pValue, directoryName, caseName, hlaFactoryName, pieceIndexRange, pieceCount, nullIndexRange));
}
public void MergedRanges ()
{
RangeCollection range = new RangeCollection ();
int [] indexes = new int [] { 0, 7, 5, 9, 1, 6, 8, 2, 10, 12 };
_TestRanges (range, indexes);
Assert.AreEqual (3, range.RangeCount);
int i= 0;
foreach (RangeCollection.Range r in range.Ranges) {
switch (i++) {
case 0:
Assert.AreEqual (0, r.Start);
Assert.AreEqual (2, r.End);
break;
case 1:
Assert.AreEqual (5, r.Start);
Assert.AreEqual (10, r.End);
break;
case 2:
Assert.AreEqual (12, r.Start);
Assert.AreEqual (12, r.End);
break;
default:
Assert.Fail ("This should not be reached!");
break;
}
}
}
public static RangeCollection Union(this RangeCollection rangeCollection1, RangeCollection rangeCollection2)
{
RangeCollection result = new RangeCollection(rangeCollection1);
result.AddRangeCollection(rangeCollection2);
return(result);
}
public void IndexOf()
{
RangeCollection range = new RangeCollection();
range.Add(0);
range.Add(2);
range.Add(3);
range.Add(5);
range.Add(6);
range.Add(7);
range.Add(8);
range.Add(11);
range.Add(12);
range.Add(13);
Assert.AreEqual(0, range.IndexOf(0));
Assert.AreEqual(1, range.IndexOf(2));
Assert.AreEqual(2, range.IndexOf(3));
Assert.AreEqual(3, range.IndexOf(5));
Assert.AreEqual(4, range.IndexOf(6));
Assert.AreEqual(5, range.IndexOf(7));
Assert.AreEqual(6, range.IndexOf(8));
Assert.AreEqual(7, range.IndexOf(11));
Assert.AreEqual(8, range.IndexOf(12));
Assert.AreEqual(9, range.IndexOf(13));
Assert.AreEqual(-1, range.IndexOf(99));
}
public void Tabulate(string directory, string caseName, List <KeyValuePair <int, int> > firstNullAndLastNullList)
{
List <Dictionary <string, string> > realRowCollectionToSort = new List <Dictionary <string, string> >();
List <double> nullDiffCollectionToBeSorted = new List <double>();
//!!!move VirusCount.PhyloTree.RangeCollection to a more general place
RangeCollection rangeCollection = RangeCollection.GetInstance();
int minFirstNull = int.MaxValue;
int maxLastNull = int.MinValue;
foreach (KeyValuePair <int, int> firstNullAndLastNull in firstNullAndLastNullList)
{
int firstNull = firstNullAndLastNull.Key;
minFirstNull = Math.Min(minFirstNull, firstNull);
int lastNull = firstNullAndLastNull.Value;
maxLastNull = Math.Max(maxLastNull, lastNull);
//!!!string repeated elsewere
//!!!what "new" or not?
string inputFileName = string.Format(@"{0}\{1}.{2}.{3}-{4}.pValues.new.txt", directory, SelectionName, CaseName, firstNull, lastNull); //!!!const
int maxNullSeen = int.MinValue;
//foreach (Dictionary<string, string> row in SpecialFunctions.TabFileTable(inputFileName, true))
foreach (Dictionary <string, string> row in SpecialFunctions.TabFileTable(inputFileName, PValueDetails.Header, true))
{
int nullIndex = int.Parse(row["NullIndex"]);
rangeCollection.TryAdd(nullIndex);
if (nullIndex == -1)
{
realRowCollectionToSort.Add(row);
}
else
{
double value = AccessPValueFromRow(row);
nullDiffCollectionToBeSorted.Add(value);
maxNullSeen = Math.Max(maxNullSeen, nullIndex);
}
}
}
SpecialFunctions.CheckCondition(realRowCollectionToSort.Count != 0);
SpecialFunctions.CheckCondition(rangeCollection.IsComplete(minFirstNull, maxLastNull));
int nullCount = maxLastNull - Math.Max(0, minFirstNull) + 1;
Dictionary <Dictionary <string, string>, double>
qValueList = SpecialFunctions.ComputeQValues(ref realRowCollectionToSort, AccessPValueFromRow, ref nullDiffCollectionToBeSorted, nullCount);
string outputFile = string.Format(@"{0}\{1}.{2}.{3}.qValues.new.txt", directory, SelectionName, CaseName, nullCount); //!!!const
using (StreamWriter outputStream = File.CreateText(outputFile))
{
outputStream.WriteLine(SpecialFunctions.CreateTabString(PValueDetails.Header, "qValue"));
foreach (Dictionary <string, string> row in realRowCollectionToSort)
{
double qValue = qValueList[row];
outputStream.WriteLine(SpecialFunctions.CreateTabString(row[""], qValue));
}
}
}
public RangeCollection Typical_Overlap()
{
var ret = new RangeCollection();
ret.Add(new RangeInt64(3, 7));
ret.Add(new RangeInt64(5, 10));
return(ret);
}
internal ItemContainerGenerator (ItemsControl owner)
{
Cache = new Queue <DependencyObject> ();
ContainerIndexMap = new DoubleKeyedDictionary <DependencyObject, int> ();
ContainerItemMap = new Dictionary <DependencyObject, object> ();
Owner = owner;
RealizedElements = new RangeCollection ();
}
public void MultipleNumbers()
{
var range = new RangeCollection(1, 50);
range.AddRangeSpecifier("5,7,9,5");
RangeCollectionTests.AssertContains(new[] { 5, 7, 9 }, range, "range");
}
public void SingleNumber()
{
var range = new RangeCollection(1, 50);
range.AddRangeSpecifier("5");
RangeCollectionTests.AssertContains(new[] { 5 }, range, "range");
}
/// <summary>
/// Represents a <see cref="Model"/> that executes the appropriate selection logic requested by different commands.
/// </summary>
public SelectionModel()
: base(NAME)
{
this.items = new List<object>(0);
this.SelectedItems = new SelectedItemsCollection();
this.selectionMode = SelectionMode.Extended;
this.ranges = new RangeCollection();
}
internal ItemContainerGenerator(ItemsControl owner)
{
Cache = new Queue <DependencyObject> ();
ContainerIndexMap = new DoubleKeyedDictionary <DependencyObject, int> ();
ContainerItemMap = new Dictionary <DependencyObject, object> ();
Owner = owner;
RealizedElements = new RangeCollection();
}
public void AddSimple()
{
var coll = new RangeCollection();
Assert.AreEqual(new Range[0], coll);
coll.Add(0..1);
coll.Add(6..9);
Assert.AreEqual(new[] { 0..1, 6..9 }, coll);
public RangeCollection Typical_Sparse()
{
var ret = new RangeCollection();
ret.Add(new RangeInt64(-13, -7));
ret.Add(new RangeInt64(-3, 3));
ret.Add(new RangeInt64(7, 13));
return(ret);
}
public void Range()
{
var range = new RangeCollection(1, 50);
range.AddRangeSpecifier("10-20");
RangeCollectionTests.AssertContains(
new[] { 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20 }, range, "range");
}
public void RangeWithStep()
{
var range = new RangeCollection(1, 50);
range.AddRangeSpecifier("10-20/3");
RangeCollectionTests.AssertContains(
new[] { 10, 13, 16, 19 }, range, "range");
}
public void All()
{
var range = new RangeCollection(1, 10);
range.AddRangeSpecifier("*");
RangeCollectionTests.AssertContains(
new[] { 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 }, range, "range");
}
private static RangeCollection _SetupTestRemoveMerges()
{
RangeCollection range = new RangeCollection();
int [] indexes = new int [] {
0,
2, 3, 4, 5,
7, 8, 9, 10, 11,
14, 15,
17, 18, 19
};
foreach (int index in indexes)
{
range.Add(index);
}
int i = 0;
foreach (RangeCollection.Range r in range.Ranges)
{
switch (i++)
{
case 0:
Assert.AreEqual(0, r.Start);
Assert.AreEqual(0, r.End);
break;
case 1:
Assert.AreEqual(2, r.Start);
Assert.AreEqual(5, r.End);
break;
case 2:
Assert.AreEqual(7, r.Start);
Assert.AreEqual(11, r.End);
break;
case 3:
Assert.AreEqual(14, r.Start);
Assert.AreEqual(15, r.End);
break;
case 4:
Assert.AreEqual(17, r.Start);
Assert.AreEqual(19, r.End);
break;
default:
Assert.Fail("Should never reach here");
break;
}
}
return(range);
}
private void AddCommentsFromXml()
{
var lst = new List<IRangeID>();
foreach (XmlElement node in CommentXml.SelectNodes("//d:commentList/d:comment", NameSpaceManager))
{
var comment = new ExcelComment(NameSpaceManager, node, new ExcelRangeBase(Worksheet, node.GetAttribute("ref")));
lst.Add(comment);
}
_comments = new RangeCollection(lst);
}
public void ContainsTest()
{
var c = new RangeCollection();
c.Add(new AddressRange(1, 100));
c.Add(new AddressRange(-10, -1));
for (var i = -15; i < 120; i++)
{
var shouldContain = (i >= -10 && i <= -1) || (i >= 1 && i <= 100);
Assert.Equal(shouldContain, c.Contains(new AddressRange(i, i)));
}
}
public void Run(RangeCollection pieceIndexRange, int pieceCount, RangeCollection nullIndexRange, TextWriter writer)
{
writer.WriteLine(PValueDetails.Header);
foreach (int nullIndex in nullIndexRange.Elements)
{
Dictionary <string, Set <Hla> > pidToHlaSet = PidToHlaSetForThisNullIndex(nullIndex);
CreatePeptideToHlaToPValueDetails(pieceIndexRange, pieceCount, nullIndex, pidToHlaSet, writer);
}
}
public void ExplicitInterface()
{
ICollection <int> range = new RangeCollection {
1,
2,
5,
6
};
Assert.AreEqual(4, range.Count);
}
private void AddRange(RangeCollection collection, string specifier, string name)
{
try
{
collection.AddRangeSpecifier(specifier);
}
catch (Exception ex)
{
throw new ArgumentException("Unable to process " + name + " specifier: " + ex.Message, ex);
}
}
public void ExplicitInterface()
{
ICollection <int> range = new RangeCollection();
range.Add(1);
range.Add(2);
range.Add(5);
range.Add(6);
Assert.AreEqual(4, range.Count);
}
public void Add(RangeCollection rowCollection)
{
lock (_lockObj)
{
_rangePendingCheckin.AddRangeCollection(rowCollection);
if (_rangePendingCheckin.Count() >= _bufferSize)
{
NonBlockingFlush();
}
}
}
public void ContainsTest()
{
RangeCollection c = new RangeCollection();
c.Add(new AddressRange(1, 100));
c.Add(new AddressRange(-10, -1));
for (int i = -15; i < 120; i++)
{
bool shouldContain = (i >= -10 && i <= -1) || (i >= 1 && i <= 100);
Assert.AreEqual(shouldContain, c.Contains(new AddressRange(i, i)), "#1." + i);
}
}
public void ValidateDivideWork()
{
RangeCollection rangeColl = new RangeCollection(1, 500);
long[] arr1 = rangeColl.ToArray();
long pieceCount = 2;
long batchCount = 2;
RangeCollection skipListOrNull = new RangeCollection(1, 3);
IEnumerable <KeyValuePair <long, long> > keyValuePair = SpecialFunctions.DivideWork <long>(arr1, rangeColl, pieceCount, batchCount, skipListOrNull);
Assert.AreEqual(248, keyValuePair.Count());
}
internal void SetUp(Matrix <TRowKey, TColKey, TValue> parentMatrix, IEnumerable <int> colIndexSequence)
{
ParentMatrix = parentMatrix;
//Check that not missing any column indexes or have extra
IndexOfParentCol = colIndexSequence.ToList();
Helper.CheckCondition(IndexOfParentCol.Count == ParentMatrix.ColCount, "Every column must be mentioned in the permutation.");
RangeCollection rangeCollection = new RangeCollection(colIndexSequence);
Helper.CheckCondition(rangeCollection.IsComplete(0, ParentMatrix.ColCount - 1), "Every column must be mentioned exactly once");
}
/// <summary>
/// Initializes a new instance of the <see cref="ByteRangeStream" /> class.
/// </summary>
/// <param name="ranges">The HTTP range header contents.</param>
/// <param name="innerStream">The inner stream which we should transfer a range from. The stream is owned by this class.</param>
public ByteRangeStream(RangeCollection ranges, Stream innerStream)
{
if (innerStream == null) throw new ArgumentNullException("innerStream");
if (innerStream.Position != 0)
throw new ArgumentException("The stream must be at position 0 for this range class to work",
"innerStream");
if (!innerStream.CanSeek) throw new ArgumentException("Stream must be seekable.", "innerStream");
if (!innerStream.CanRead) throw new ArgumentException("Stream must be readablle", "innerStream");
_ranges = ranges;
_innerStream = innerStream;
}
internal void SetUp(Matrix <TRowKey, TColKey, TValue> parentMatrix, IEnumerable <int> colIndexSequence)
{
ParentMatrix = parentMatrix;
//Check that there are not any missing or extra column indexes
IndexOfParentCol = colIndexSequence.ToList();
Helper.CheckCondition(IndexOfParentCol.Count == ParentMatrix.ColCount, Properties.Resource.ExpectedEveryColumnToBeAMemberOfThePermutation);
RangeCollection rangeCollection = new RangeCollection(colIndexSequence);
Helper.CheckCondition(rangeCollection.IsComplete(0, ParentMatrix.ColCount - 1), Properties.Resource.ExpectedEveryColumnToBeUsedOnceInThePermuation);
}
/// <summary>
/// Initializes a new instance of the <see cref="ByteRangeStream" /> class.
/// </summary>
/// <param name="ranges">The HTTP range header contents.</param>
/// <param name="innerStream">The inner stream which we should transfer a range from. The stream is owned by this class.</param>
public ByteRangeStream(RangeCollection ranges, Stream innerStream)
{
if (innerStream == null) throw new ArgumentNullException("innerStream");
if (innerStream.Position != 0)
throw new ArgumentException("The stream must be at position 0 for this range class to work",
"innerStream");
if (!innerStream.CanSeek) throw new ArgumentException("Stream must be seekable.", "innerStream");
if (!innerStream.CanRead) throw new ArgumentException("Stream must be readablle", "innerStream");
_ranges = ranges;
_innerStream = innerStream;
}
public void Refresh()
{
int index = current_track == null ? Count : TrackModel.IndexOf(current_track);
// If the current track is not playing refresh it too.
if (current_track != null && !ServiceManager.PlayerEngine.IsPlaying(current_track))
{
index--;
}
if (index + 1 < Count)
{
// Get the ViewOrder of the current_track
long current_view_order = CurrentTrackViewOrder;
// Get the list of generated tracks.
var generated = new HashSet <long> ();
foreach (long trackID in ServiceManager.DbConnection.QueryEnumerable <long> (@"
SELECT TrackID
FROM CorePlaylistEntries
WHERE PlaylistID = ? AND Generated = 1 AND ViewOrder >= ?",
DbId, current_view_order))
{
generated.Add(trackID);
}
// Collect the indices of all generated tracks.
var ranges = new RangeCollection();
for (int i = index + 1; i < Count; i++)
{
if (generated.Contains(((DatabaseTrackInfo)TrackModel[i]).TrackId))
{
ranges.Add(i);
}
}
bool removed = false;
foreach (var range in ranges.Ranges)
{
RemoveTrackRange(DatabaseTrackModel, range);
removed = true;
}
if (removed)
{
OnTracksRemoved();
}
}
else if (Count == 0 || current_track == null)
{
UpdatePlayQueue();
}
}
public RangeCollection GetTypicalRangeCollection()
{
var rangeColl = new RangeCollection();
rangeColl.Add(
new RangeInt64(
4, 12));
rangeColl.Add(
new RangeInt64(
50, 60));
return(rangeColl);
}
public void ReadOneRangePartially()
{
var stream = CreateTextStream();
var ranges = new RangeCollection();
ranges.Parse("bytes=0-99", (int)stream.Length);
byte[] target = new byte[100];
var stream2 = new ByteRangeStream(ranges, stream);
stream2.Read(target, 0, 50);
stream2.Read(target, 50, 50);
Assert.Equal(GetString().Substring(0,100), Encoding.ASCII.GetString(target, 0, 100));
}
private TraditionalJob(Action jobDelegate)
{
if (jobDelegate == null)
throw new ArgumentNullException("jobDelegate");
this.jobDelegate = jobDelegate;
MinuteRange = new RangeCollection(0, 59);
HourRange = new RangeCollection(0, 23);
DateRange = new RangeCollection(1, 31);
MonthRange = new RangeCollection(1, 12);
DayOfWeekRange = new RangeCollection(0, 6);
}
internal ExcelVmlDrawingCommentCollection(ExcelPackage pck, ExcelWorksheet ws, Uri uri) :
base(pck, ws,uri)
{
if (uri == null)
{
VmlDrawingXml.LoadXml(CreateVmlDrawings());
_drawings = new RangeCollection(new List<IRangeID>());
}
else
{
AddDrawingsFromXml(ws);
}
}
public void LargeSequentialContains ()
{
RangeCollection range = new RangeCollection ();
int i, n = 1000000;
for (i = 0; i < n; i++) {
range.Add (i);
}
for (i = 0; i < n; i++) {
Assert.AreEqual (true, range.Contains (i));
}
}
internal ExcelVmlDrawingCommentCollection(ExcelPackage pck, ExcelWorksheet ws, Uri uri) :
base(pck, ws, uri)
{
if (uri == null)
{
VmlDrawingXml.LoadXml(CreateVmlDrawings());
_drawings = new RangeCollection(new List <IRangeID>());
}
else
{
AddDrawingsFromXml(ws);
}
}
public static void AddRangeSpecifier(this RangeCollection self, string specifier)
{
if (self == null)
throw new ArgumentNullException("self");
if (specifier == null)
throw new ArgumentNullException("specifier");
string[] list = specifier.Split(',');
RangeCollection staging = new RangeCollection(self.Minimum, self.Maximum);
foreach (string i in list)
{
Match match = rangeRegex.Match(i);
if (!match.Success)
ThrowBadRangeSpecifier(specifier);
if (match.Groups["single"].Success)
{
staging.Add(int.Parse(match.Groups["single"].Value));
}
else
{
int start = self.Minimum;
int end = self.Maximum;
int step = 1;
if (match.Groups["step"].Success)
step = int.Parse(match.Groups["step"].Value);
if (match.Groups["start"].Success)
{
start = int.Parse(match.Groups["start"].Value);
end = int.Parse(match.Groups["end"].Value);
}
if (end < start)
ThrowBadRangeSpecifier(specifier);
for (int j = start; j <= end; j += step)
staging.Add(j);
}
}
foreach (int i in staging)
self.Add(i);
}
/// <summary>
/// Run Tasks.
/// </summary>
/// <param name="tasksToRun">Tasks to Run.</param>
/// <param name="taskCount">Task Count.</param>
public override void RunTasks(RangeCollection tasksToRun, long taskCount)
{
#if !SILVERLIGHT
using (Process proc = new Process())
{
proc.StartInfo.FileName = ExeName;
proc.StartInfo.Arguments = CommandArgs;
proc.StartInfo.UseShellExecute = false;
proc.Start();
proc.WaitForExit();
if (proc.ExitCode > 0)
throw new Exception("Unable to execute " + ExeName + " " + CommandArgs);
}
#endif
}
public void ValidateRunTasks()
{
CommandApp commandApp = new CommandApp();
RangeCollection rangeColl = new RangeCollection(1, 500);
try
{
commandApp.RunTasks(rangeColl, 10);
ApplicationLog.WriteLine("CommandApp BVT: CommandApp RunTasks Validated successfully");
}
catch (Exception ex)
{
ApplicationLog.WriteLine(string.Format((IFormatProvider)null,
"CommandApp BVT: CommandApp RunTasks Validated successfully: {0}", ex.Message));
Assert.Fail("CommandApp BVT: CommandApp RunTasks Not validated successfully");
}
}
public void AddTest3()
{
RangeCollection c = new RangeCollection();
List<AddressRange> ranges = c.Ranges;
c.Add(new AddressRange(0, 100));
c.Add(new AddressRange(200, 300));
c.Add(new AddressRange(150, 600));
Assert.AreEqual(2, ranges.Count, "#1");
Assert.AreEqual(new AddressRange(0, 100), ranges[0], "#1b");
Assert.AreEqual(new AddressRange(150, 600), ranges[1], "#1c");
c.Add(new AddressRange(102, 500));
Assert.AreEqual(2, ranges.Count, "#2");
Assert.AreEqual(new AddressRange(102, 600), ranges[1], "#2b");
c.Add(new AddressRange(400, 700));
Assert.AreEqual(2, ranges.Count, "#3");
Assert.AreEqual(new AddressRange(102, 700), ranges[1], "#3b");
}
public void AddTest3()
{
var c = new RangeCollection();
var ranges = c.Ranges;
c.Add(new AddressRange(0, 100));
c.Add(new AddressRange(200, 300));
c.Add(new AddressRange(150, 600));
Assert.Equal(2, ranges.Count);
Assert.Equal(new AddressRange(0, 100), ranges[0]);
Assert.Equal(new AddressRange(150, 600), ranges[1]);
c.Add(new AddressRange(102, 500));
Assert.Equal(2, ranges.Count);
Assert.Equal(new AddressRange(102, 600), ranges[1]);
c.Add(new AddressRange(400, 700));
Assert.Equal(2, ranges.Count);
Assert.Equal(new AddressRange(102, 700), ranges[1]);
}
/// <summary>
/// Runs the tasks
/// </summary>
/// <param name="tasksToRun">number of tasks to be ran in a range collection</param>
/// <param name="taskCount">task count</param>
public override void RunTasks(RangeCollection tasksToRun, long taskCount)
{
ISequenceParser parser = SequenceParsers.FindParserByFileName(InputFile.FullName);
var allTheWorkQuery = parser.Parse(InputFile.FullName);
var myWorkAndAnIndex = SpecialFunctions.DivideWork(allTheWorkQuery, tasksToRun, taskCount, 1, new RangeCollection());
var myUniqueResultFileName = GetFileTaskFileName(tasksToRun.ToString());
float gcCount = 0;
long seqLength = 0;
using (TextWriter writer = File.CreateText(myUniqueResultFileName))
{
// loop all sequences in current task
foreach (var numberAndIndex in myWorkAndAnIndex)
{
writer.WriteLine(">" + numberAndIndex.Key.ID);
foreach (byte val in numberAndIndex.Key)
{
seqLength++;
switch (val)
{
case (byte)'G':
case (byte)'g':
case (byte)'C':
case (byte)'c':
gcCount++;
break;
}
}
if (gcCount > 0)
writer.Write(((gcCount / (float)seqLength) * 100) + "%");
else
writer.Write(gcCount + "%");
seqLength = 0;
gcCount = 0;
writer.WriteLine();
}
}
}
private void HandleRangeRequest(IRequest request)
{
var rangeHeader = request.Headers["Range"];
var response = request.CreateResponse(HttpStatusCode.PartialContent, "Welcome");
response.ContentType = "application/octet-stream";
response.AddHeader("Accept-Ranges", "bytes");
response.AddHeader("Content-Disposition", @"attachment;filename=""ReallyBigFile.Txt""");
//var fileStream = new FileStream(Environment.CurrentDirectory + @"\Ranges\ReallyBigFile.Txt", FileMode.Open,
// FileAccess.Read, FileShare.ReadWrite);
var fileStream = new FileStream(@"C:\Users\jgauffin\Downloads\AspNetMVC3ToolsUpdateSetup.exe", FileMode.Open,
FileAccess.Read, FileShare.ReadWrite);
var ranges = new RangeCollection();
ranges.Parse(rangeHeader.Value, (int)fileStream.Length);
response.AddHeader("Content-Range", ranges.ToHtmlHeaderValue((int)fileStream.Length));
response.Body = new ByteRangeStream(ranges, fileStream);
Send(response);
}
public void AddTest()
{
RangeCollection c = new RangeCollection();
c.Add(new AddressRange(50, 50));
c.Add(new AddressRange(50, 50));
Assert.AreEqual(1, c.Ranges.Count, "#1");
c.Add(new AddressRange(50, 51));
Assert.AreEqual(1, c.Ranges.Count, "#2");
c.Add(new AddressRange(51, 51));
Assert.AreEqual(new AddressRange(50, 51), c.Ranges[0], "#2b");
c.Add(new AddressRange(50, 50));
c.Add(new AddressRange(49, 50));
Assert.AreEqual(1, c.Ranges.Count, "#3");
Assert.AreEqual(new AddressRange(49, 51), c.Ranges[0], "#3b");
c.Add(new AddressRange(45, 47));
Assert.AreEqual(2, c.Ranges.Count, "#4");
Assert.AreEqual(new AddressRange(49, 51), c.Ranges[1], "#4b");
c.Add(new AddressRange(47, 49));
Assert.AreEqual(1, c.Ranges.Count, "#5");
Assert.AreEqual(new AddressRange(45, 51), c.Ranges[0], "#4b");
}
public void AddTest()
{
var c = new RangeCollection();
c.Add(new AddressRange(50, 50));
c.Add(new AddressRange(50, 50));
Assert.Equal(1, c.Ranges.Count);
c.Add(new AddressRange(50, 51));
Assert.Equal(1, c.Ranges.Count);
c.Add(new AddressRange(51, 51));
Assert.Equal(new AddressRange(50, 51), c.Ranges[0]);
c.Add(new AddressRange(50, 50));
c.Add(new AddressRange(49, 50));
Assert.Equal(1, c.Ranges.Count);
Assert.Equal(new AddressRange(49, 51), c.Ranges[0]);
c.Add(new AddressRange(45, 47));
Assert.Equal(2, c.Ranges.Count);
Assert.Equal(new AddressRange(49, 51), c.Ranges[1]);
c.Add(new AddressRange(47, 49));
Assert.Equal(1, c.Ranges.Count);
Assert.Equal(new AddressRange(45, 51), c.Ranges[0]);
}
protected void AddDrawingsFromXml(ExcelWorksheet ws)
{
var nodes = VmlDrawingXml.SelectNodes("//v:shape", NameSpaceManager);
var list = new List<IRangeID>();
foreach (XmlNode node in nodes)
{
var rowNode = node.SelectSingleNode("x:ClientData/x:Row", NameSpaceManager);
var colNode = node.SelectSingleNode("x:ClientData/x:Column", NameSpaceManager);
if (rowNode != null && colNode != null)
{
var row = int.Parse(rowNode.InnerText) + 1;
var col = int.Parse(colNode.InnerText) + 1;
list.Add(new ExcelVmlDrawingComment(node, ws.Cells[row, col], NameSpaceManager));
}
else
{
list.Add(new ExcelVmlDrawingComment(node, ws.Cells[1, 1], NameSpaceManager));
}
}
list.Sort(new Comparison<IRangeID>((r1, r2) => (r1.RangeID < r2.RangeID ? -1 : r1.RangeID > r2.RangeID ? 1 : 0))); //Vml drawings are not sorted. Sort to avoid missmatches.
_drawings = new RangeCollection(list);
}
public void TestRemovingRanges()
{
RangeCollection ranges = new RangeCollection();
ranges.AddRange(0, 4);
ranges.RemoveRange(1, 2);
Assert.AreEqual(2, ranges.Count);
Assert.AreEqual(new Range(0, 0), ranges[0]);
Assert.AreEqual(new Range(3, 4), ranges[1]);
ranges.Clear();
ranges.AddRange(0, 4);
ranges.RemoveRange(0, 1);
Assert.AreEqual(1, ranges.Count);
Assert.AreEqual(new Range(2, 4), ranges[0]);
ranges.Clear();
ranges.AddRange(0, 4);
ranges.RemoveRange(4, 4);
Assert.AreEqual(1, ranges.Count);
Assert.AreEqual(new Range(0, 3), ranges[0]);
}
public void AddTest2()
{
RangeCollection c = new RangeCollection();
List<AddressRange> ranges = c.Ranges;
c.Add(new AddressRange(0, 100));
c.Add(new AddressRange(101, 200));
Assert.AreEqual(1, ranges.Count, "#1");
Assert.AreEqual(new AddressRange(0, 200), ranges[0], "#1b");
c.Add(new AddressRange(300, 400));
c.Add(new AddressRange(500, 600));
Assert.AreEqual(3, ranges.Count, "#2");
c.Add(new AddressRange(50, 205));
Assert.AreEqual(3, ranges.Count, "#3");
Assert.AreEqual(new AddressRange(0, 205), ranges[0], "#3b");
c.Add(new AddressRange(-100, -1));
Assert.AreEqual(3, ranges.Count, "#4");
Assert.AreEqual(new AddressRange(-100, 205), ranges[0], "#4b");
c.Add(new AddressRange(206, 299));
Assert.AreEqual(2, ranges.Count, "#5");
Assert.AreEqual(new AddressRange(-100, 400), ranges[0], "#5b");
c.Add(new AddressRange(0, 600));
Assert.AreEqual(1, ranges.Count, "#6");
Assert.AreEqual(new AddressRange(-100, 600), ranges[0], "#6b");
}
